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WormBase Tree Display for Gene: WBGene00121403

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Name Class

WBGene00121403SMapS_parentSequenceCjap.Contig17202
IdentityVersion2
NameCGC_nameCjp-rab-10From_analysisInferred_from_orthology
Sequence_nameCJA02199
Molecular_nameCJA02199
CJA02199.1
JA12762
Public_nameCjp-rab-10
SpeciesCaenorhabditis japonica
HistoryVersion_change129 Aug 2008 14:34:20WBPerson4055EventImportedfrom NGASP
Name_changeCGC_nameCjp-rab-10
229 Jul 2011 11:13:37WBPerson4055EventImportedAugustus import
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrab
RNASeq_FPKMWBls:0000004177.188From_analysisRNASeq.japonica.WBls:0000004.control_mean
RNASeq.japonica.WBls:0000004.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX100095
WBls:0000027106.392From_analysisRNASeq.japonica.WBls:0000027.control_mean
RNASeq.japonica.WBls:0000027.control_median
RNASeq.japonica.WBStrain00041019.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX100090
WBls:000003873.0582From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100091
77.8217From_analysisRNASeq.japonica.WBls:0000038.control_mean
RNASeq.japonica.WBls:0000038.control_median
82.5853From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX100092
WBls:0000041100.592From_analysisRNASeq.japonica.WBls:0000041.control_mean
146.743From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191959
164.77From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191961
168.718From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191960
28.5414From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP006033.SRX100093
60.986From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191962
72.3451From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191964
73.9306From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191963
81.3169From_analysisRNASeq.japonica.WBls:0000041.control_median
88.7032From_analysisRNASeq.japonica.WBStrain00041019.WBls:0000041.Female.WBbt:0007833.SRP006033.SRX100094
WBls:000010182.5853From_analysisRNASeq.japonica.total_over_all_stages.control_median
95.6893From_analysisRNASeq.japonica.total_over_all_stages.control_mean
GO_annotation00188414
00188415
OrthologWBGene00004272Caenorhabditis elegansFrom_analysisTreeFam
WBGene00004273Caenorhabditis elegansFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00033549Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00062318Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00068981Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00094694Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WBGene00158546Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00147970Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00142282Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00158802Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00226233Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g9853Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g1777Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g6224Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g14777Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2990Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16133Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5371Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7793Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23970Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g6116Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00205.g6968Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-rab-10Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g20342Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02492.g26709Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_16144Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_002811Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g09740Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g4286Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10327900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_10328000Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00094695Pristionchus pacificusFrom_analysisWormBase-Compara
chrI_pilon.g1157Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237732Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00258796Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289332Trichuris murisFrom_analysisWormBase-Compara
WBGene00297157Trichuris murisFrom_analysisWormBase-Compara
Paralog (36)
Structured_descriptionAutomated_descriptionPredicted to enable GTP binding activity and GTPase activity. Is an ortholog of C. elegans rab-10. In C. elegans, rab-10 is involved in several processes, including negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process; receptor recycling; and vesicle-mediated transport.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCJA02199
Corresponding_transcriptCJA02199.1
Other_sequence (85)
Experimental_infoExpr_patternExpr1079578
Microarray_resultsGPL14145_CJA02199_223-282_0.934_5_C
GPL14145_CJA02199_352-411_0.956_1_A
GPL14145_CJA02199_455-514_0.840_19_B
MethodGene