WormBase Tree Display for Gene: WBGene00057242

WBGene00057242 SMap: S_parent: Sequence: Crem_Contig16
  Identity: Version: 3
    Name: CGC_name: Cre-nhr-62 From_analysis: Inferred_from_orthology
      Sequence_name: CRE08264
      Molecular_name: CRE08264
        CRE08264.1
        RP33514
      Other_name: cr01.sctg8.wum.182
      Public_name: Cre-nhr-62
    Species: Caenorhabditis remanei
    History: Version_change: 1 09 Nov 2007 10:19:26 WBPerson1847 Event: Created
        2 29 Nov 2007 17:00:43 WBPerson2970 Name_change: CGC_name: Cre-nhr-62
        3 03 Jul 2008 11:45:10 WBPerson4055 Event: Imported: from NGASP
              Name_change: Sequence_name: CRE08264
                Other_name: cr01.sctg8.wum.182
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nhr
    RNASeq_FPKM: WBls:0000004 4.37631 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
        4.82851 From_analysis: RNASeq.remanei.WBls:0000004.control_mean
            RNASeq.remanei.WBls:0000004.control_median
        5.2807 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
      WBls:0000024 (53)
      WBls:0000027 10.1216 From_analysis: RNASeq.remanei.WBls:0000027.control_median
        13.0306 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
        16.4475 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
        1.98505 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
        7.21256 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
        9.66893 From_analysis: RNASeq.remanei.WBls:0000027.control_mean
      WBls:0000038 12.0808 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
        1.67502 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
        7.82466 From_analysis: RNASeq.remanei.WBls:0000038.control_mean
        9.71817 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
            RNASeq.remanei.WBls:0000038.control_median
      WBls:0000041 0.97603 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
        0.993159 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
        1.51229 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
        2.40141 From_analysis: RNASeq.remanei.WBls:0000041.control_median
        2.46242 From_analysis: RNASeq.remanei.WBls:0000041.control_mean
        3.29053 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
        3.59653 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
        4.40601 From_analysis: RNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
      WBls:0000063 (12)
      WBls:0000101 3.38527 From_analysis: RNASeq.remanei.total_over_all_stages.control_median
        4.42532 From_analysis: RNASeq.remanei.total_over_all_stages.control_mean
    GO_annotation: 00152702
      00152703
      00152704
      00152705
    Ortholog: WBGene00003652 Caenorhabditis elegans From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00026633 Caenorhabditis briggsae From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00117276 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144501 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00138649 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142006 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00223242 Brugia malayi From_analysis: WormBase-Compara
      WBGene00242085 Onchocerca volvulus From_analysis: WormBase-Compara
      CBOVI.g9437 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5247 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7276 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7859 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4537 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19356 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8133 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5613 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g12564 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g10528 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00001.g75 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-nhr-62 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold613.g5938 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00566.g12956 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17572 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_000753 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09715 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g17725 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g19135 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g5310 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10180400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g1915 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00288616 Trichuris muris From_analysis: WormBase-Compara
    Paralog (273)
    Structured_description: Automated_description: Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Is an ortholog of C. elegans nhr-62. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: CRE08264
    Corresponding_transcript: CRE08264.1
    Other_sequence (21)
  Experimental_info: Expr_pattern: Expr1099377
    Microarray_results: GPL14146_CRE08264_1064-1123_0.922_12_B
      GPL14146_CRE08264_1327-1386_0.943_1_A
      GPL14146_CRE08264_874-933_0.822_115_C
  Method: Gene