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WormBase Tree Display for Gene: WBGene00057150

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Name Class

WBGene00057150SMapS_parentSequenceCrem_Contig120
IdentityVersion3
NameCGC_nameCre-itx-1From_analysisInferred_from_orthology
Sequence_nameCRE01206
Molecular_nameCRE01206
CRE01206.1
RP08255
Other_namecr01.sctg8.wum.95
Public_nameCre-itx-1
SpeciesCaenorhabditis remanei
HistoryVersion_change109 Nov 2007 10:19:26WBPerson1847EventCreated
229 Nov 2007 17:00:40WBPerson2970Name_changeCGC_nameCre-itx-1
303 Jul 2008 11:45:09WBPerson4055EventImportedfrom NGASP
Name_changeSequence_nameCRE01206
Other_namecr01.sctg8.wum.95
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classitx
RNASeq_FPKMWBls:00000040.599015From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101881
0.611658From_analysisRNASeq.remanei.WBls:0000004.control_mean
RNASeq.remanei.WBls:0000004.control_median
0.6243From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000004.Unknown.WBbt:0007833.SRP006033.SRX101882
WBls:0000024 (53)
WBls:000002710.7436From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101884
10.962From_analysisRNASeq.remanei.WBls:0000027.control_mean
12.6875From_analysisRNASeq.remanei.WBls:0000027.control_median
14.6315From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101883
15.8037From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX101885
2.66935From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000027.Unknown.WBbt:0007833.SRP006033.SRX052082
WBls:000003810.4467From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101880
4.36008From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX052083
7.95871From_analysisRNASeq.remanei.WBls:0000038.control_mean
9.06934From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000038.Unknown.WBbt:0007833.SRP006033.SRX101879
RNASeq.remanei.WBls:0000038.control_median
WBls:00000413.66664From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191972
3.77578From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191973
4.15304From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Female.WBbt:0007833.SRP016006.SRX191971
4.42922From_analysisRNASeq.remanei.WBls:0000041.control_mean
4.47846From_analysisRNASeq.remanei.WBls:0000041.control_median
4.80387From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191974
4.97563From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191975
5.20035From_analysisRNASeq.remanei.WBStrain00042077.WBls:0000041.Male.WBbt:0007833.SRP016006.SRX191976
WBls:0000063 (12)
WBls:00001017.3483From_analysisRNASeq.remanei.total_over_all_stages.control_mean
8.73643From_analysisRNASeq.remanei.total_over_all_stages.control_median
OrthologWBGene00002174Caenorhabditis elegansFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00026840Caenorhabditis briggsaeFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00190454Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00156910Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00224178Brugia malayiFrom_analysisWormBase-Compara
WBGene00215684Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218365Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00240854Onchocerca volvulusFrom_analysisWormBase-Compara
CSP26.g17644Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g15427Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g23646Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP32.g13043Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g14533Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g23600Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g23476Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00611.g12762Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-itx-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold627.g6867Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02720.g27677Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_20148Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_000848Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g11219Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22670Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g5190Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10142700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrI_pilon.g399Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00258054Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00286504Trichuris murisFrom_analysisWormBase-Compara
WBGene00301890Trichuris murisFrom_analysisWormBase-Compara
Paralog (58)
Structured_descriptionAutomated_descriptionIs predicted to encode a protein with the following domains: EGF-like domain; Laminin G domain; and Concanavalin A-like lectin/glucanase domain superfamily. Is an ortholog of C. elegans itx-1.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCRE01206
Corresponding_transcriptCRE01206.1
Other_sequenceEX911309.1
Hbac_isotig07106
Oden_isotig24110
HBC28443_1
Experimental_infoExpr_patternExpr1102063
Microarray_resultsGPL14146_CRE01206_2806-2865_0.726_250_A
GPL14146_CRE01206_2849-2908_0.780_131_B
GPL14146_CRE01206_4251-4310_0.903_9_C
MethodGene