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WormBase Tree Display for Gene: WBGene00038898

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Name Class

WBGene00038898SMapS_parentSequencecb25.fpc4140
IdentityVersion2
NameCGC_nameCbr-unc-122From_analysisInferred_from_orthology
Sequence_nameCBG19728
Molecular_nameCBG19728
CBG19728.1
CBP32235
Other_nameCBG_19728Accession_evidenceNDBHE601474
Public_nameCbr-unc-122
DB_infoDatabaseNDBlocus_tagCBG_19728
SpeciesCaenorhabditis briggsae
HistoryVersion_change (2)
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
RNASeq_FPKM (10)
OrthologWBGene00006845Caenorhabditis elegansFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00104188Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00060887Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00152160Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00132561Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
CSP21.g5711Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g19748Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8262Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g13382Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22982Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9263Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g22104Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g9216Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12499Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00265.g8134Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-122Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18982Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02318.g25949Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09139Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_001458Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12064Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g16539Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_10010510Caenorhabditis inopinataFrom_analysisWormBase-Compara
WBGene00223567Brugia malayiFrom_analysisWormBase-Compara
chrI_pilon.g2984Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00237993Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00260092Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287578Trichuris murisFrom_analysisWormBase-Compara
ParalogWBGene00032956Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00033502Caenorhabditis briggsaeFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionIs affected by Cbr-spr-4 based on RNA-seq studies. Is predicted to encode a protein with the following domains: Olfactomedin-like domain; Collagen triple helix repeat; and Collagen triple helix repeat (20 copies). Is an ortholog of C. elegans unc-122. In C. elegans, unc-122 is involved in negative regulation of cholinergic synaptic transmission.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSCBG19728
Corresponding_CDS_historyCBG19728:bp194
Corresponding_transcriptCBG19728.1
Other_sequence (15)
Experimental_infoExpr_patternExpr1060018
Microarray_resultsGPL8303_CB6_WBGene00038898_A
GPL8303_CB6_WBGene00038898_B
GPL8303_CB6_WBGene00038898_C
GPL8303_CB6_WBGene00038898_D
GPL8303_CB6_WBGene00038898_E
GPL14143_CBG19728_541-600_0.536_234_C
GPL14143_CBG19728_1008-1067_0.906_25_B
GPL14143_CBG19728_1211-1270_0.909_22_A
Expression_clusterWBPaper00059178:Cbr-spr-4(gu163)_downregulated
MethodGene