WormBase Tree Display for Gene: WBGene00022448

WBGene00022448 SMap: S_parent: Sequence: Y110A2AL
  Identity: Version: 2
    Name: CGC_name: pinn-1 Paper_evidence: WBPaper00041179
          Person_evidence: WBPerson10488
      Sequence_name: Y110A2AL.13
      Molecular_name: Y110A2AL.13
        Y110A2AL.13.1
        CE45876
      Other_name: Pin1 Paper_evidence: WBPaper00026884
        CELE_Y110A2AL.13 Accession_evidence: NDB BX284602
      Public_name: pinn-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Jun 2012 17:03:10 WBPerson2970 Name_change: CGC_name: pinn-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pinn
    Allele (80)
    Strain: WBStrain00022153
    RNASeq_FPKM (74)
    GO_annotation (13)
    Contained_in_operon: CEOP2072
      CEOP2074
    Ortholog: WBGene00054584 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038800 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00153352 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00160252 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00218561 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00227534 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g6854 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g12842 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g434 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g15993 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22944 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g5969 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1911 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21041 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6117 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g13590 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-pinn-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g9211 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00183.g6509 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_006769 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g13520 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14980 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20044610 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g3811 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00238834 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304724 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00256637 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291382 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003778 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0015379 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1714 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:8988 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1346036 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:3649546 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1310299 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog: WBGene00012996 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in regulation of macromolecule metabolic process; regulation of nitrogen compound metabolic process; and regulation of primary metabolic process. Predicted to be located in cytosol and nucleus. Is an ortholog of human PIN1 (peptidylprolyl cis/trans isomerase, NIMA-interacting 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y110A2AL.13
    Corresponding_CDS_history: Y110A2AL.13:wp224
    Corresponding_transcript: Y110A2AL.13.1
    Other_sequence (38)
    Associated_feature: WBsf665413
      WBsf222811
  Experimental_info: RNAi_result: WBRNAi00111990 Inferred_automatically: RNAi_primary
      WBRNAi00055297 Inferred_automatically: RNAi_primary
      WBRNAi00111992 Inferred_automatically: RNAi_primary
      WBRNAi00111988 Inferred_automatically: RNAi_primary
      WBRNAi00111986 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram412
      Expr6880
      Expr13243
      Expr16133
      Expr1015411
      Expr1039913
      Expr1158834
      Expr2014931
      Expr2033166
    Drives_construct: WBCnstr00003923
    Microarray_results (18)
    Expression_cluster (110)
    Interaction (72)
  Map_info: Map: II Position: -9.55762
    Positive: Positive_clone: Y110A2AL Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026884
    WBPaper00038491
    WBPaper00041179
    WBPaper00050654
    WBPaper00055090
    WBPaper00059048
    WBPaper00060142
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene