WormBase Tree Display for Gene: WBGene00012996
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| WBGene00012996 | SMap | S_parent | Sequence | Y48C3A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pinn-4 | Paper_evidence | WBPaper00041179 | |||||
| Person_evidence | WBPerson10488 | ||||||||
| Sequence_name | Y48C3A.16 | ||||||||
| Molecular_name | Y48C3A.16 | ||||||||
| Y48C3A.16.1 | |||||||||
| CE22150 | |||||||||
| Other_name | Pin2 | Paper_evidence | WBPaper00026884 | ||||||
| CELE_Y48C3A.16 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | pinn-4 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 29 Jun 2012 17:03:10 | WBPerson2970 | Name_change | CGC_name | pinn-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pinn | ||||||||
| Allele (102) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP2606 | ||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00022448 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable DNA binding activity and peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in rRNA processing. Located in plasma membrane. Expressed in head; intestinal cell; and tail. Is an ortholog of human PIN4 (peptidylprolyl cis/trans isomerase, NIMA-interacting 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y48C3A.16 | |||||||
| Corresponding_transcript | Y48C3A.16.1 | ||||||||
| Other_sequence (87) | |||||||||
| Associated_feature | WBsf222358 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00037240 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00111991 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111987 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056896 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111989 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092996 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00111993 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr421 | ||||||||
| Expr9461 | |||||||||
| Expr16134 | |||||||||
| Expr1012779 | |||||||||
| Expr1035771 | |||||||||
| Expr1160345 | |||||||||
| Expr2014932 | |||||||||
| Expr2033167 | |||||||||
| Construct_product | WBCnstr00014026 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (72) | |||||||||
| Interaction (31) | |||||||||
| Map_info | Map | II | Position | 16.8098 | |||||
| Positive | Positive_clone | Y48C3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026884 | ||||||||
| WBPaper00038444 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041179 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
