WormBase Tree Display for Gene: WBGene00022104

WBGene00022104 SMap: S_parent: Sequence: CHROMOSOME_III
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: acsd
    Allele (802)
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog: WBGene00032806 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            WormBase-Compara
      WBGene00141946 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00144321 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00084385 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00155597 Caenorhabditis brenneri From_analysis: TreeFam
      CBOVI.g5723 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g5725 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g1722 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1296 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g1298 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12884 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22422 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10955 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g10957 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g10585 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13592 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g13594 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g942 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4513 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      CSP40.g4516 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_III.g8816 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_III.g8818 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8631 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02849.g28125 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08945 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_011607 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_011609 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11661 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g7349 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30316600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_30316800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g6890 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00178887 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00261086 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261088 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-070410-103 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:19288 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2386323 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:620868 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Automated_description: Predicted to enable aminocarboxymuconate-semialdehyde decarboxylase activity. Predicted to be involved in negative regulation of quinolinate biosynthetic process and secondary metabolic process. Predicted to be located in cytosol. Is an ortholog of human ACMSD (aminocarboxymuconate semialdehyde decarboxylase). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y71D11A.3a
      Y71D11A.3b
    Corresponding_transcript: Y71D11A.3a.1
      Y71D11A.3b.1
    Other_sequence (73)
    Associated_feature (15)
  Experimental_info: RNAi_result: WBRNAi00058143 Inferred_automatically: RNAi_primary
      WBRNAi00006749 Inferred_automatically: RNAi_primary
      WBRNAi00021363 Inferred_automatically: RNAi_primary
      WBRNAi00058141 Inferred_automatically: RNAi_primary
      WBRNAi00058142 Inferred_automatically: RNAi_primary
      WBRNAi00037766 Inferred_automatically: RNAi_primary
      WBRNAi00007106 Inferred_automatically: RNAi_primary
      WBRNAi00006872 Inferred_automatically: RNAi_primary
      WBRNAi00022387 Inferred_automatically: RNAi_primary
      WBRNAi00058144 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11716
      Expr1020774
      Expr1039723
      Expr1161566
      Expr2009220
      Expr2027457
    Microarray_results (27)
    Expression_cluster (180)
    Interaction: WBInteraction000155639
      WBInteraction000542945
      WBInteraction000542948
      WBInteraction000578729
      WBInteraction000584374
  Map_info: Map: III Position: -22.7145
    Positive: Positive_clone: Y71D11A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038487
    WBPaper00038491
    WBPaper00055090
    WBPaper00055535
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene