WormBase Tree Display for Gene: WBGene00021560

WBGene00021560 SMap: S_parent: Sequence: Y45G5AM
  Identity: Version: 2
    Name: CGC_name: coh-4 Person_evidence: WBPerson574
      Sequence_name: Y45G5AM.8
      Molecular_name: Y45G5AM.8a
        Y45G5AM.8a.1
        CE27409
        Y45G5AM.8b
        CE51569
        Y45G5AM.8c
        CE51556
        Y45G5AM.8b.1
        Y45G5AM.8c.1
      Other_name: CELE_Y45G5AM.8 Accession_evidence: NDB BX284605
      Public_name: coh-4
    DB_info: Database: AceView gene 5E652
        WormQTL gene WBGene00021560
        WormFlux gene WBGene00021560
        NDB locus_tag CELE_Y45G5AM.8
        NCBI gene 178818
        RefSeq protein NM_001330833.3
            NM_071760.3
            NM_001330834.3
        TrEMBL UniProtAcc A0A168HB71
            Q95XJ4
            A0A163UTM2
        UniProt_GCRP UniProtAcc Q95XJ4
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:04 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 30 Mar 2009 16:33:08 WBPerson9133 Name_change: CGC_name: coh-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: coh
    Allele (163)
    Strain: WBStrain00035161
      WBStrain00035162
      WBStrain00035163
      WBStrain00035164
      WBStrain00055740
    RNASeq_FPKM (74)
    GO_annotation: 00089042
    Contained_in_operon: CEOP5562
    Ortholog: WBGene00054081 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032905 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00164586 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00154292 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130530 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00150504 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00193794 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CSP26.g8857 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8640 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g10846 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g10722 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g1824 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4134 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cnig_chr_I.g111 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_03470.g30299 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04545 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006255 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_006256 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10099800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g13935 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00000592 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
    Structured_description: Concise_description: coh-4 encodes a member of the Rad21/Rec8-like family of cohesion proteins known as kleisins; COH-4, along with its paralogs REC-8 and COH-3, function as members of a meiotic cohesin complex that mediates sister chromatid cohesion. Paper_evidence: WBPaper00034684
          Curator_confirmed: WBPerson1843
          Date_last_updated: 29 Nov 2010 00:00:00
      Automated_description: Involved in meiotic sister chromatid cohesion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y45G5AM.8a
      Y45G5AM.8b
      Y45G5AM.8c
    Corresponding_transcript: Y45G5AM.8a.1
      Y45G5AM.8b.1
      Y45G5AM.8c.1
    Associated_feature: WBsf668649
      WBsf668856
      WBsf668857
      WBsf999747
      WBsf999748
      WBsf999749
      WBsf1019467
      WBsf233561
  Experimental_info: RNAi_result: WBRNAi00056638 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11961
      Expr1039438
      Expr1160110
      Expr2010299
      Expr2028541
    Antibody: WBAntibody00002562
      WBAntibody00002687
    Microarray_results (12)
    Expression_cluster (94)
    Interaction: WBInteraction000554911
      WBInteraction000560270
      WBInteraction000583689
      WBInteraction000584069
  Map_info: Map: V Position: -6.34419 Error: 0.01466
    Positive: Positive_clone: Y45G5AM Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene