WormBase Tree Display for Gene: WBGene00020895

WBGene00020895 SMap: S_parent: Sequence: T28D9
  Identity: Version: 2
    Name: CGC_name: plpp-1.2 Person_evidence: WBPerson580
      Sequence_name: T28D9.3
      Molecular_name (13)
      Other_name: CELE_T28D9.3 Accession_evidence: NDB BX284602
      Public_name: plpp-1.2
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 31 May 2017 14:23:55 WBPerson2970 Name_change: CGC_name: plpp-1.2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: plpp
    Allele (43)
    Strain: WBStrain00031488
    RNASeq_FPKM (74)
    GO_annotation: 00005278
      00005279
      00055921
      00055922
      00055923
      00055924
      00055925
      00125415
    Ortholog: WBGene00054090 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00025682 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00135568 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00115378 Pristionchus pacificus From_analysis: OMA
      WBGene00161350 Caenorhabditis brenneri From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00162338 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00127653 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00058423 Caenorhabditis remanei From_analysis: TreeFam
      CBOVI.g7261 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g11648 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g7580 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g228 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g12577 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g2136 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11928 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1604 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g1605 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3184 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g8539 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00209.g7056 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-T28D9.3 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g11563 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00127.g5066 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_04554 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006264 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02245 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20278500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g4777 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00096359 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00276224 Pristionchus pacificus From_analysis: WormBase-Compara
      SGD:S000002911 Saccharomyces cerevisiae From_analysis: Inparanoid
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:9229 Homo sapiens From_analysis: OMA
            Panther
            PhylomeDB
    Paralog: WBGene00008749 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011524 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018756 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable phosphatidate phosphatase activity. Predicted to be involved in phospholipid dephosphorylation; phospholipid metabolic process; and signal transduction. Predicted to be located in membrane. Is an ortholog of human PLPP3 (phospholipid phosphatase 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T28D9.3a
      T28D9.3b
      T28D9.3d
    Corresponding_CDS_history: T28D9.3:wp127
      T28D9.3c:wp247
      T28D9.3e:wp247
    Corresponding_transcript: T28D9.3c
      T28D9.3e
      T28D9.3a.1
      T28D9.3b.1
      T28D9.3b.2
      T28D9.3d.1
      T28D9.3d.2
    Other_sequence (10)
    Associated_feature: WBsf644291
      WBsf644292
      WBsf644293
      WBsf221451
      WBsf221452
  Experimental_info: RNAi_result: WBRNAi00054418 Inferred_automatically: RNAi_primary
      WBRNAi00070139 Inferred_automatically: RNAi_primary
      WBRNAi00019401 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027274
      Expr1039103
      Expr1157962
      Expr2006622
      Expr2024839
    Drives_construct: WBCnstr00024803
    Construct_product: WBCnstr00024803
    Microarray_results (35)
    Expression_cluster (148)
    Interaction (19)
  Map_info: Map: II Position: -0.219459
    Positive: Positive_clone: T28D9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028527
    WBPaper00038491
    WBPaper00042257
    WBPaper00055090
    WBPaper00065998
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene