WormBase Tree Display for Gene: WBGene00020135

WBGene00020135 SMap: S_parent: Sequence: T01B6
  Identity: Version: 2
    Name: CGC_name: aakg-4 Person_evidence: WBPerson11446
      Sequence_name: T01B6.3
      Molecular_name: T01B6.3a
        T01B6.3a.1
        CE33820
        T01B6.3b
        CE33821
        T01B6.3b.1
      Other_name: CELE_T01B6.3 Accession_evidence: NDB BX284606
      Public_name: aakg-4
    DB_info: Database: AceView gene XC930
        WormQTL gene WBGene00020135
        WormFlux gene WBGene00020135
        NDB locus_tag CELE_T01B6.3
        Panther gene CAEEL|WormBase=WBGene00020135|UniProtKB=H2L0K0
          family PTHR13780
        NCBI gene 187928
        RefSeq protein NM_171633.7
            NM_171632.4
        TREEFAM TREEFAM_ID TF313247
        TrEMBL UniProtAcc H2L0K0
            Q8MPT4
        UniProt_GCRP UniProtAcc H2L0K0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 09 Jul 2010 16:38:16 WBPerson2970 Name_change: CGC_name: aakg-4
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aakg
    Allele (71)
    RNASeq_FPKM (74)
    GO_annotation: 00023136
      00023137
      00023138
      00023139
      00023140
      00023141
    Ortholog: WBGene00025247 Caenorhabditis briggsae From_analysis (4)
      WBGene00071051 Caenorhabditis remanei From_analysis (4)
      WBGene00160866 Caenorhabditis brenneri From_analysis (4)
      WBGene00129186 Caenorhabditis japonica From_analysis (3)
      WBGene00143909 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00068667 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00133925 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00225713 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2814 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g7157 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g18916 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15676 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g21979 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16666 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g21714 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g19159 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g18875 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00327.g9271 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-aakg-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold576.g4458 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00062.g2997 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_00969 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023929 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14002 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_X0103300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g18597 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00239547 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00291353 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000418 Saccharomyces cerevisiae From_analysis (2)
      SGD:S000003024 Saccharomyces cerevisiae From_analysis (2)
    Paralog: WBGene00011276 Caenorhabditis elegans From_analysis (3)
      WBGene00013732 Caenorhabditis elegans From_analysis (2)
      WBGene00021527 Caenorhabditis elegans From_analysis (3)
      WBGene00020633 Caenorhabditis elegans From_analysis (2)
    Structured_description: Concise_description: aakg-4 encodes one of five C. elegans AMP kinase (AMPK) gamma regulatory subunits. Paper_evidence: WBPaper00031352
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Jul 2010 00:00:00
      Automated_description: Predicted to enable AMP binding activity; protein kinase binding activity; and protein kinase regulator activity. Predicted to be involved in monoatomic ion transport. Predicted to be located in cytoplasm and nucleus. Predicted to be part of nucleotide-activated protein kinase complex. Expressed in several structures, including accessory cell; dorsal nerve cord; neurons; non-striated muscle; and preanal ganglion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T01B6.3a
      T01B6.3b
    Corresponding_CDS_history (2)
    Corresponding_transcript: T01B6.3a.1
      T01B6.3b.1
    Other_sequence: Dviv_isotig26865
    Associated_feature (13)
  Experimental_info: RNAi_result: WBRNAi00052079 Inferred_automatically: RNAi_primary
      WBRNAi00017937 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11586
      Expr1012719
      Expr1155710
      Expr2009059
      Expr2027295
    Drives_construct: WBCnstr00018960
      WBCnstr00025352
    Construct_product: WBCnstr00025352
    Microarray_results (27)
    Expression_cluster (194)
    Interaction (74)
  Map_info: Map: X Position: -15.733 Error: 0.0468
    Positive: Positive_clone: T01B6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00044832
    WBPaper00064229
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene