WormBase Tree Display for Gene: WBGene00020037

WBGene00020037 SMap: S_parent: Sequence: R12E2
  Identity: Version: 2
    Name: CGC_name: mrps-6 Person_evidence: WBPerson261
            WBPerson555
      Sequence_name: R12E2.12
      Molecular_name: R12E2.12
        R12E2.12.1
        CE33159
      Other_name: CELE_R12E2.12 Accession_evidence: NDB BX284601
      Public_name: mrps-6
    DB_info: Database (10)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 10 Jun 2011 16:50:10 WBPerson2970 Name_change: CGC_name: mrps-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mrps
    Allele (17)
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP1144
    Ortholog: WBGene00033093 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00062371 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00121323 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00158894 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00161830 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g10281 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3797 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g14806 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g6985 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1950 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g8412 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g4457 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g13397 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g6691 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16393 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-mrps-6 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold627.g6670 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00212.g7157 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08262 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_002257 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_10178000 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g657 Caenorhabditis elegans From_analysis: WormBase-Compara
      SGD:S000001486 Saccharomyces cerevisiae From_analysis: Hieranoid
            OrthoFinder
            Panther
      FB:FBgn0035534 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-060825-59 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:14051 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2153111 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2322928 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: mrps-6 encodes the C. elegans ortholog of mitochondrial ribosomal protein S6. Curator_confirmed: WBPerson1843
          Date_last_updated: 10 Apr 2014 00:00:00
      Automated_description: Predicted to enable small ribosomal subunit rRNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Is an ortholog of human MRPS6 (mitochondrial ribosomal protein S6). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R12E2.12
    Corresponding_CDS_history: R12E2.12:wp92
    Corresponding_transcript: R12E2.12.1
    Other_sequence (29)
    Associated_feature: WBsf664129
      WBsf219252
  Experimental_info: RNAi_result: WBRNAi00026106 Inferred_automatically: RNAi_primary
      WBRNAi00084349 Inferred_automatically: RNAi_primary
      WBRNAi00022426 Inferred_automatically: RNAi_primary
      WBRNAi00026107 Inferred_automatically: RNAi_primary
      WBRNAi00051849 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011794
      Expr1038708
      Expr1155508
      Expr2013757
      Expr2031992
    Drives_construct: WBCnstr00025412
    Construct_product: WBCnstr00025412
    Microarray_results (19)
    Expression_cluster (100)
    Interaction (16)
  Map_info: Map: I Position: -1.63852 Error: 0.00276
    Positive: Positive_clone: R12E2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00047123
    WBPaper00055090
    WBPaper00065026
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene