WormBase Tree Display for Gene: WBGene00019645

WBGene00019645 SMap: S_parent: Sequence: K11D12
  Identity: Version: 2
    Name: CGC_name: swt-7 Paper_evidence: WBPaper00037817
          Person_evidence: WBPerson12258
      Sequence_name: K11D12.5
      Molecular_name: K11D12.5
        K11D12.5.1
        CE12134
      Other_name: CELE_K11D12.5 Accession_evidence: NDB BX284605
      Public_name: swt-7
    DB_info: Database: AceView gene 5F508
        WormQTL gene WBGene00019645
        WormFlux gene WBGene00019645
        NDB locus_tag CELE_K11D12.5
        Panther gene CAEEL|WormBase=WBGene00019645|UniProtKB=O44620
          family PTHR10791
        NCBI gene 178890
        RefSeq protein NM_071948.4
        TREEFAM TREEFAM_ID TF313635
        TrEMBL UniProtAcc O44620
        UniProt_GCRP UniProtAcc O44620
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 14 Dec 2010 10:49:16 WBPerson2970 Name_change: CGC_name: swt-7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: swt
    Allele (32)
    RNASeq_FPKM (74)
    GO_annotation (15)
    Ortholog: WBGene00052687 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00030403 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00146641 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00135584 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00140179 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00141618 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00160753 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00153173 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00192263 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00155642 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00140268 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00132320 Caenorhabditis japonica From_analysis: TreeFam
      WBGene00055796 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00059294 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00071884 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00073119 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00225266 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g217 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g15432 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4073 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14885 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5105 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g6613 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15037 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16066 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g16067 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g14606 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g843 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00124.g5019 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g18683 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13163 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00032.g1759 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_13993 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018462 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00441 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g1008 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50184100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14144 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244266 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00091409 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00093699 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00277371 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00278981 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00256730 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286937 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00002295 Caenorhabditis elegans From_analysis: Panther
      WBGene00007384 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00010594 Caenorhabditis elegans From_analysis: TreeFam
            Panther
      WBGene00011190 Caenorhabditis elegans From_analysis: Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00012647 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016922 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00019300 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: swt-7 encodes a transmembrane protein that is a member of the SWEET1 family of sugar transporters. Curator_confirmed: WBPerson1843
          Date_last_updated: 03 Jun 2014 00:00:00
      Automated_description: Predicted to enable sugar transmembrane transporter activity. Involved in defense response to Gram-negative bacterium and innate immune response. Predicted to be located in Golgi membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K11D12.5
    Corresponding_transcript: K11D12.5.1
    Other_sequence (62)
    Associated_feature: WBsf233632
  Experimental_info: RNAi_result (4)
    Expr_pattern: Expr1023688
      Expr1038483
      Expr1154297
      Expr2017169
      Expr2035305
    Drives_construct: WBCnstr00025705
    Construct_product: WBCnstr00025705
    Microarray_results (19)
    Expression_cluster (158)
    Interaction: WBInteraction000188156
      WBInteraction000315247
      WBInteraction000359514
      WBInteraction000376566
      WBInteraction000406393
      WBInteraction000542656
  Map_info: Map: V Position: -3.5787 Error: 0.002491
    Positive: Positive_clone: K11D12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00028482
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene