WormBase Tree Display for Gene: WBGene00018890

WBGene00018890 SMap: S_parent: Sequence: F55F8
  Identity: Version: 1
    Name: Sequence_name: F55F8.2
      Molecular_name: F55F8.2a
        F55F8.2a.1
        CE11190
        F55F8.2b
      Other_name: CELE_F55F8.2 Accession_evidence: NDB BX284601
      Public_name: F55F8.2
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (34)
    RNASeq_FPKM (74)
    GO_annotation (11)
    Contained_in_operon: CEOP1276
    Ortholog: WBGene00059622 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00147206 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00035298 Caenorhabditis briggsae From_analysis: Hillier-set
            WormBase-Compara
      WBGene00104966 Pristionchus pacificus From_analysis: OMA
      WBGene00271602 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00224697 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g4662 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6815 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g13429 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g6409 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g9745 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g12552 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g22378 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP32.g6778 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11866 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g5411 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_00053.g2741 Caenorhabditis angaria From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15157 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15175 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00491.g12053 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_001321 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03868 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03870 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g4645 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10298720 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g966 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00126320 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00218295 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00246400 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00263521 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288456 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000346 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0034496 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-100716-4 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:13266 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1351337 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:727929 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (37)
    Structured_description: Concise_description: F55F8.2 encodes a DEAD-box helicase; loss of F55F8.2 activity via RNAi indicates that F55F8.2 activity is required for positive regulation of growth rate, larval development, vulval morphogenesis, cuticle development, reproduction, and the overall health of the animal. Paper_evidence: WBPaper00005599
            WBPaper00006395
            WBPaper00024497
            WBPaper00025054
            WBPaper00031057
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Oct 2007 00:00:00
      Automated_description: Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be located in nucleolus. Is an ortholog of human DDX24 (DEAD-box helicase 24). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F55F8.2a
    Corresponding_CDS_history: F55F8.2b:wp256
    Corresponding_transcript: F55F8.2b
      F55F8.2a.1
    Other_sequence (36)
    Associated_feature: WBsf219463
  Experimental_info: RNAi_result (14)
    Expr_pattern: Expr1016259
      Expr1038149
      Expr1152311
      Expr2004233
      Expr2022456
    Drives_construct: WBCnstr00026209
    Construct_product: WBCnstr00026209
    Microarray_results (22)
    Expression_cluster (111)
    Interaction (226)
  Map_info: Positive: Positive_clone: F55F8 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 0.288148
  Reference: WBPaper00028451
    WBPaper00038491
    WBPaper00055090
  Method: Gene