WormBase Tree Display for Gene: WBGene00018491

WBGene00018491 SMap: S_parent: Sequence: F46E10
  Identity: Version: 2
    Name: CGC_name: mdh-1 Person_evidence: WBPerson676
      Sequence_name: F46E10.10
      Molecular_name: F46E10.10
        F46E10.10.1
        CE20820
      Other_name: F46E10.g Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_F46E10.10 Accession_evidence: NDB BX284605
      Public_name: mdh-1
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 18 Aug 2010 11:15:35 WBPerson2970 Name_change: CGC_name: mdh-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mdh
    Allele (26)
    RNASeq_FPKM (74)
    GO_annotation (20)
    Contained_in_operon: CEOP5120
    Ortholog: WBGene00052171 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038253 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            WormBase-Compara
      WBGene00141624 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00118357 Pristionchus pacificus From_analysis: OMA
            WormBase-Compara
      WBGene00151491 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00035534 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00132488 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00224408 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1768 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5611 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8481 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8736 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5503 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11259 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14909 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g10697 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3955 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g11361 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00182.g6384 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_02557.g17305 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_15168.g24947 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_17883.g25824 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_26671.g27448 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-mdh-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g17518 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00013.g856 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10797 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_017941 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00879 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16044 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50214600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14453 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00123545 Caenorhabditis japonica From_analysis: WormBase-Compara
      WBGene00242774 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00279005 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00263671 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00285771 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0262782 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040204-1 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:6970 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      MGI:97051 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:3072 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Structured_description: Concise_description: mdh-1 encodes a malate dehydrogenase; by homology, MDH-1 is predicted to function to reversibly catalyze the formation of oxaloacetate from malate. Curator_confirmed: WBPerson1843
          Date_last_updated: 26 Oct 2011 00:00:00
      Automated_description: Enables L-malate dehydrogenase activity. Involved in malate metabolic process. Predicted to be located in cytosol. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 88. Is an ortholog of human MDH1 (malate dehydrogenase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0112222 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6970)
  Molecular_info (5)
  Experimental_info: RNAi_result: WBRNAi00015088 Inferred_automatically: RNAi_primary
      WBRNAi00106994 Inferred_automatically: RNAi_primary
      WBRNAi00047523 Inferred_automatically: RNAi_primary
      WBRNAi00033295 Inferred_automatically: RNAi_primary
      WBRNAi00088638 Inferred_automatically: RNAi_primary
      WBRNAi00103124 Inferred_automatically: RNAi_primary
      WBRNAi00088745 Inferred_automatically: RNAi_primary
      WBRNAi00103123 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr12927
      Expr1023310
      Expr1037971
      Expr1151361
      Expr2013465
      Expr2031699
    Drives_construct: WBCnstr00026475
    Construct_product: WBCnstr00026475
    Microarray_results (29)
    Expression_cluster (170)
    Interaction (52)
    WBProcess: WBbiopr:00000096
  Map_info: Map: V Position: 0.000662
    Positive: Positive_clone: F46E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (15)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene