WormBase Tree Display for Gene: WBGene00018039

WBGene00018039 SMap: S_parent: Sequence: F35D2
  Identity: Version: 2
    Name: Sequence_name: F35D2.1
      Molecular_name: F35D2.1
        F35D2.1.1
        CE45842
      Other_name: CELE_F35D2.1 Accession_evidence: NDB BX284602
      Public_name: F35D2.1
    DB_info: Database: AceView gene 2H865
        WormQTL gene WBGene00018039
        WormFlux gene WBGene00018039
        NDB locus_tag CELE_F35D2.1
        Panther gene CAEEL|WormBase=WBGene00018039|UniProtKB=F1LIL6
          family PTHR36520
        NCBI gene 185276
        RefSeq protein NM_063189.4
        TREEFAM TREEFAM_ID TF315642
        TrEMBL UniProtAcc F1LIL6
        UniProt_GCRP UniProtAcc F1LIL6
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:59 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 20 Jan 2010 15:57:12 WBPerson1867 Event: Split_into: WBGene00194916
      Split_into: WBGene00194916
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (30)
    RNASeq_FPKM (74)
    Ortholog: WBGene00033847 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
      WBGene00054390 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00178435 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00270421 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CBOVI.g6191 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g4081 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP21.g7853 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP29.g9207 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g27493 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g27494 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16826 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g655 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g656 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g657 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g658 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20873 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cang_2012_03_13_00080.g3674 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00080.g3675 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00337.g9411 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_II.g5406 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold625.g6329 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00169.g6157 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_09390 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_006552 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g20013 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20251510 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5055 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00090044 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258148 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00265002 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291762 Trichuris muris From_analysis: WormBase-Compara
      WBGene00293784 Trichuris muris From_analysis: WormBase-Compara
    Paralog: WBGene00013891 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00016132 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018040 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00220261 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in OLL; PVD; head mesodermal cell; and hypodermis based on microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by nine chemicals including Ethanol; methylmercury hydroxide; and manganese chloride based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F35D2.1
    Corresponding_CDS_history: F35D2.1:wp156
      F35D2.1:wp211
      F35D2.1:wp224
    Corresponding_transcript: F35D2.1.1
    Associated_feature: WBsf644393
  Experimental_info: RNAi_result: WBRNAi00046326 Inferred_automatically: RNAi_primary
      WBRNAi00014323 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016376
      Expr1150215
      Expr2003315
      Expr2021528
    Microarray_results (13)
    Expression_cluster (122)
    Interaction (95)
  Map_info: Positive: Positive_clone: F35D2 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.50473
  Method: Gene