WormBase Tree Display for Gene: WBGene00018040
expand all nodes | collapse all nodes | view schema
| WBGene00018040 | SMap | S_parent | Sequence | F35D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F35D2.2 | |||||||
| Molecular_name | F35D2.2 | ||||||||
| F35D2.2.1 | |||||||||
| CE36839 | |||||||||
| Other_name | CELE_F35D2.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F35D2.2 | ||||||||
| DB_info | Database | AceView | gene | 2H863 | |||||
| WormQTL | gene | WBGene00018040 | |||||||
| WormFlux | gene | WBGene00018040 | |||||||
| NDB | locus_tag | CELE_F35D2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018040|UniProtKB=Q20044 | |||||||
| family | PTHR36520 | ||||||||
| NCBI | gene | 185277 | |||||||
| RefSeq | protein | NM_063188.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315642 | |||||||
| TrEMBL | UniProtAcc | Q20044 | |||||||
| UniProt_GCRP | UniProtAcc | Q20044 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00013891 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00016132 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00018039 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00220261 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalapaaaa; ABalappapa; AVK; XXX cell; and rect_D based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray and RNA-seq studies. Is affected by seventeen chemicals including methylmercury hydroxide; manganese chloride; and Alovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35D2.2 | |||||||
| Corresponding_CDS_history | F35D2.2:wp125 | ||||||||
| Corresponding_transcript | F35D2.2.1 | ||||||||
| Other_sequence | ES744114.1 | ||||||||
| CJC17426_1 | |||||||||
| HBC05223_1 | |||||||||
| EX007024.1 | |||||||||
| Associated_feature | WBsf644392 | ||||||||
| WBsf988487 | |||||||||
| WBsf988488 | |||||||||
| WBsf1012555 | |||||||||
| WBsf221614 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00046327 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014324 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015309 | ||||||||
| Expr1037774 | |||||||||
| Expr1150216 | |||||||||
| Expr2003316 | |||||||||
| Expr2021529 | |||||||||
| Drives_construct | WBCnstr00026822 | ||||||||
| Construct_product | WBCnstr00026822 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (151) | |||||||||
| Interaction (39) | |||||||||
| Map_info | Positive | Positive_clone | F35D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.504726 | |||||||
| Method | Gene |
