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WormBase Tree Display for Gene: WBGene00017244

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Name Class

WBGene00017244SMapS_parentSequenceF08C6
IdentityVersion2
NameCGC_nameapy-1Paper_evidenceWBPaper00031456
Sequence_nameF08C6.6
Molecular_nameF08C6.6
F08C6.6.1
CE27925
Other_nameCELE_F08C6.6Accession_evidenceNDBBX284606
Public_nameapy-1
DB_infoDatabase (13)
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:58WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
207 Feb 2008 17:23:14WBPerson2970Name_changeCGC_nameapy-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classapy
Allele (32)
StrainWBStrain00035260
WBStrain00033129
RNASeq_FPKM (74)
GO_annotation (36)
OrthologWBGene00051299Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00036596Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00147267Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00089940Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00135517Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00223455Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g2373Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g8078Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14218Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19965Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g2882Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g20543Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1712Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6098Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g7639Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g20820Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00783.g14113Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_14789.g24793Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-apy-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g12433Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00054.g2731Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00144Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024807Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g13246Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g10420Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0207900Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19434Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00238958Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257878Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00298070Trichuris murisFrom_analysisWormBase-Compara
WBGene00302176Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0037900Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040426-2441Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:19721Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1923275Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:628743Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00044355Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionConcise_descriptionapy-1 encodes a membrane-bound uridine diphosphatase (UDPase, endo-apyrase) orthologous to human CANT1 and paralogous to ZK563.7; APY-1 is required for repression of the unfolded protein response of stressed endoplasmic reticulum (ER), for normally organized pharynx and thin muscle fibers in adults, and for normally high fertility, rapid growth, and long lifespan; apy-1 is transcriptionally activated by tunicamycin, 6% EtOH, or excess heat (25 degrees C), each of which stresses the ER, and this activation requires both ATF-6 and IRE-1; APY-1 can hydrolyze either UDP or GDP, but has more activity with UDP.Paper_evidenceWBPaper00031456
Curator_confirmedWBPerson567
Date_last_updated16 Jul 2008 00:00:00
Automated_descriptionEnables GDP phosphatase activity and UDP phosphatase activity. Involved in several processes, including determination of adult lifespan; endoplasmic reticulum unfolded protein response; and ribonucleoside diphosphate catabolic process. Located in membrane. Expressed in hypodermis and pharynx. Human ortholog(s) of this gene implicated in Desbuquois dysplasia and multiple epiphyseal dysplasia 7. Is an ortholog of human CANT1 (calcium activated nucleotidase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0060462Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:19721)
DOID:0070302Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:19721)
Molecular_infoCorresponding_CDSF08C6.6
Corresponding_transcriptF08C6.6.1
Other_sequence (75)
Associated_feature (4)
Experimental_infoRNAi_result (15)
Expr_patternChronogram1929
Expr7496
Expr8181
Expr1022911
Expr1037405
Expr1147956
Expr2009375
Expr2027611
Drives_constructWBCnstr00000535
WBCnstr00001058
WBCnstr00012641
WBCnstr00013164
WBCnstr00027459
Construct_productWBCnstr00027459
Microarray_results (18)
Expression_cluster (187)
Interaction (39)
WBProcessWBbiopr:00000046
WBbiopr:00000079
Map_infoMapXPosition-1.52591Error0.009212
PositivePositive_cloneF08C6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00029024
WBPaper00031456
WBPaper00032062
WBPaper00038341
WBPaper00038491
WBPaper00055090
WBPaper00064934
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene