WormBase Tree Display for Gene: WBGene00016124

WBGene00016124 SMap: S_parent: Sequence: C26B2
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: dnc
    Allele (20)
    Strain: WBStrain00007370
    RNASeq_FPKM (74)
    GO_annotation: 00060430
      00060431
      00060432
      00060433
      00060434
      00060435
      00060436
      00060437
      00121805
    Ortholog: WBGene00037293 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00059406 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00073690 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00145516 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00125976 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00222649 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g10808 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g9472 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g10519 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g7094 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7221 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g9593 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g11962 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g11859 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g8851 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6542 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-dnc-4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold23.g90 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00364.g10166 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_15972 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_014773 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g10313 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g8587 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40106600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g10978 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245383 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00276970 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00297575 Trichuris muris From_analysis: WormBase-Compara
      WBGene00301331 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0033206 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050417-306 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:15518 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1914915 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:71023 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: dnc-4 encodes the C. elegans ortholog of the dynactin p62/DNTN4 subunit; dnc-4 is an essential gene required for embryonic development and pronuclear migration; dnc-4 is also required for normal mitochondrial morphology; DNC-4 is part of the multisubunit dynactin complex in vivo. Paper_evidence: WBPaper00037699
            WBPaper00038214
            WBPaper00039787
            WBPaper00025054
            WBPaper00024925
          Curator_confirmed: WBPerson1843
          Date_last_updated: 08 Aug 2012 00:00:00
      Automated_description: Part of dynactin complex. Is an ortholog of human DCTN4 (dynactin subunit 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C26B2.1
    Corresponding_transcript: C26B2.1.1
    Other_sequence: CBC04451_1
      CJC00003_1
    Associated_feature: WBsf651974
      WBsf651975
      WBsf230366
      WBsf230367
      WBsf230368
      WBsf230369
  Experimental_info: RNAi_result: WBRNAi00061521 Inferred_automatically: RNAi_primary
      WBRNAi00041234 Inferred_automatically: RNAi_primary
      WBRNAi00029210 Inferred_automatically: RNAi_primary
      WBRNAi00041235 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1013112
      Expr1036890
      Expr1145274
      Expr2010981
      Expr2029219
    Drives_construct: WBCnstr00028308
    Construct_product: WBCnstr00028308
    Microarray_results (20)
    Expression_cluster (77)
    Interaction (21)
  Map_info: Map: IV Position: 3.5819 Error: 0.00105
    Positive: Positive_clone: C26B2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00037699
    WBPaper00038491
    WBPaper00039787
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene