WormBase Tree Display for Gene: WBGene00015147

WBGene00015147 SMap: S_parent: Sequence: B0336
  Identity: Version: 1
    Name: Sequence_name: B0336.7
      Molecular_name: B0336.7a
        B0336.7a.1
        CE29546
        B0336.7b
        CE37741
        B0336.7b.1
      Other_name: CELE_B0336.7 Accession_evidence: NDB BX284603
      Public_name: B0336.7
    DB_info: Database: AceView gene 3G784
        WormQTL gene WBGene00015147
        WormFlux gene WBGene00015147
        NDB locus_tag CELE_B0336.7
        NCBI gene 175792
        RefSeq protein NM_001392106.1
            NM_065826.4
        TrEMBL UniProtAcc Q5DX39
            H2KY76
        UniProt_GCRP UniProtAcc H2KY76
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:30:55 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (42)
    RNASeq_FPKM (74)
    GO_annotation: 00021398
      00021399
    Contained_in_operon: CEOP3324
    Ortholog: WBGene00055615 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00030673 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00153050 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00132146 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CBOVI.g4179 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2448 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g1766 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g9629 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g9630 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g9749 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g15142 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17714 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15980 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3254 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g9431 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g6472 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-B0336.7 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold568.g4200 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00216.g7238 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_18498 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_010600 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_30135310 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g7768 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Concise_description: B0336.7 encodes, by alternative splicing, two isoforms of a protein witha THAP or THAP-like domain; other proteins with such domains includeLIN-15A, LIN-15B, LIN-36, and HIM-17 (which all interact withLIN-35/Rb), as well as CDC-14B, CTB-1, GON-14, and ~100 other proteinssuch as Drosophila P element transposase and human nuclear proapoptoticfactor THAP1; B0336.7 is expressed in intestine and amphid neurons. Paper_evidence: WBPaper00028973
          Curator_confirmed: WBPerson567
          Date_last_updated: 08 May 2007 00:00:00
      Automated_description: Predicted to enable DNA binding activity. Expressed in intestine and neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0336.7a
      B0336.7b
    Corresponding_CDS_history: B0336.7b:wp135
    Corresponding_transcript: B0336.7a.1
      B0336.7b.1
    Other_sequence (15)
    Associated_feature (2)
    Transcription_factor: WBTranscriptionFactor000947
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr2057
      Expr1018798
      Expr1036480
      Expr1143129
      Expr2000150
      Expr2018368
    Drives_construct: WBCnstr00029051
    Construct_product: WBCnstr00016610
      WBCnstr00029051
      WBCnstr00038845
    Microarray_results (26)
    Expression_cluster (98)
    Interaction (28)
  Map_info: Positive: Positive_clone: B0336 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: III -1.45315
  Reference: WBPaper00027882
    WBPaper00060662
  Method: Gene