WormBase Tree Display for Gene: WBGene00012604

WBGene00012604 SMap: S_parent: Sequence: Y38E10A
  Identity (6)
  Gene_info: Biotype: SO:0001217
    Gene_class: nspe
    Allele (12)
    RNASeq_FPKM (74)
    Ortholog: WBGene00072590 Caenorhabditis remanei From_analysis: OMA
      WBGene00144387 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
      WBGene00072588 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00031730 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00031731 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00031732 Caenorhabditis briggsae From_analysis: OrthoMCL
            Inparanoid_8
            WormBase-Compara
      WBGene00042852 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00059616 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00059617 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00072587 Caenorhabditis remanei From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00159672 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00192892 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00209558 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00216867 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00129049 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00206858 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00212572 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00213280 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00210734 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00209053 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00126459 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00207680 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00212684 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00207833 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00216609 Caenorhabditis japonica From_analysis: TreeFam
            WormBase-Compara
      WBGene00059613 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00059614 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00031729 Caenorhabditis briggsae From_analysis: WormBase-Compara
      CBOVI.g6317 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g6318 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP28.g15917 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g15918 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP28.g15919 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g20355 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g16950 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP31.g16951 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g16040 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g16043 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g16044 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP32.g16045 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g10091 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      Cnig_chr_II.g7586 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_II.g7587 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_II.g7588 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_II.g7589 Caenorhabditis nigoni From_analysis: WormBase-Compara
      FL83_16905 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_16906 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_16907 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_16908 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_16910 Caenorhabditis latens From_analysis: WormBase-Compara
      FL83_16912 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_007153 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_007154 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_007156 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_007157 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_007158 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_007159 Caenorhabditis remanei From_analysis: WormBase-Compara
      Sp34_20031500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_20031600 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_20031700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_20031800 Caenorhabditis inopinata From_analysis: WormBase-Compara
      Sp34_20031900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g6224 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (8)
    Structured_description: Automated_description: Enriched in several structures, including MSaapapa; MSpapapa; arcade cell; germline precursor cell; and pharyngeal-intestinal valve cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and age-1 based on microarray and RNA-seq studies. Is affected by thirty-two chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF1412) and Protein of unknown function DUF1412. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y38E10A.26
    Corresponding_transcript: Y38E10A.26.1
    Associated_feature: WBsf650662
      WBsf224085
  Experimental_info: Expr_pattern: Expr1022879
      Expr1159544
      Expr2014488
      Expr2032727
    Drives_construct: WBCnstr00029887
    Construct_product: WBCnstr00029887
    Microarray_results: 186726_at
      A_12_P117900
      GPL14144_Y38E10A.26_63-122_0.669_4_A
      GPL19516_CGZ0044582
      GPL21109_Y38E10A.26
      GPL8304_CE_WBGene00012604_A
      GPL8673_Y38E10A_26P00065
      GPL8673_Y38E10A_26P00069
      GPL8673_Y38E10A_26P00117
    Expression_cluster (208)
  Map_info: Map: II Position: 10.5038
    Positive: Positive_clone: Y38E10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene