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WormBase Tree Display for Gene: WBGene00012148

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Name Class

WBGene00012148SMapS_parentSequenceCHROMOSOME_II
IdentityVersion2
NameCGC_nameinos-1Person_evidenceWBPerson9275
Sequence_nameVF13D12L.1
Molecular_nameVF13D12L.1
VF13D12L.1.1
CE31076
Other_nameCELE_VF13D12L.1Accession_evidenceNDBBX284602
Public_nameinos-1
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:53WBPerson1971EventImportedInitial conversion from CDS class of WS125
205 May 2011 12:15:34WBPerson2970Name_changeCGC_nameinos-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classinos
Allele (39)
RNASeq_FPKM (74)
GO_annotation (11)
OrthologWBGene00053334Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00026064Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00163768Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00151776Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00107970Pristionchus pacificusFrom_analysisInparanoid_8
WormBase-Compara
CBOVI.g6344Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g6347Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g6351Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7394Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g4619Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g17039Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g20267Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g16866Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g9438Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g5409Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g23760Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22430Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00800.g14223Caenorhabditis angariaFrom_analysisWormBase-Compara
Cang_2012_03_13_13605.g24295Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-inos-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold458.g1423Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold563.g3982Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g18446Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02192.g25339Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_09347Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_005573Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g02588Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g3104Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20313400Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g6013Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00267717Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000003689Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0025885Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:29821Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1919030Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1359423Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptioninos-1 encodes the C. elegans myo-inositol-1-phosphate (MIP) synthase ortholog; by homology, the product of inos-1 is predicted to function in de novo inositol biosynthesis by catalyzing the conversion of glucose-6-phosphate to inositol-1-phosphate; loss of inos-1 activity via RNAi has been reported to result in low levels of embryonic lethality, larval lethality, slow growth, uncoordinated locomotion, and a substantial increase in fat content; loss of inos-1 activity also results in a slight increase in the variability of the defecation cycle length, although this increase is not statistically significant; in situ hybridization studies reveal that inos-1 mRNA is expressed faintly in the germline.Paper_evidenceWBPaper00005654
WBPaper00005655
WBPaper00006395
WBPaper00025054
WBPaper00027758
WBPaper00031535
Curator_confirmedWBPerson1843
Date_last_updated05 May 2011 00:00:00
Automated_descriptionPredicted to enable inositol-3-phosphate synthase activity. Predicted to be involved in inositol biosynthetic process. Predicted to be located in cytoplasm. Expressed in germ line. Is an ortholog of human ISYNA1 (inositol-3-phosphate synthase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSVF13D12L.1
Corresponding_transcriptVF13D12L.1.1
Other_sequence (81)
Associated_featureWBsf650614
WBsf650615
WBsf650616
WBsf666190
WBsf666191
WBsf989857
WBsf223984
Experimental_infoRNAi_result (8)
Expr_patternExpr4091
Expr1023077
Expr1035373
Expr1158012
Expr2012744
Expr2030981
Drives_constructWBCnstr00030104
Construct_productWBCnstr00030104
Microarray_results (19)
Expression_cluster (148)
Interaction (76)
Map_infoMapIIPosition3.99091Error0.005099
PositivePositive_cloneVF13D12LInferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (4)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene