WormBase Tree Display for Gene: WBGene00010037

WBGene00010037 SMap: S_parent: Sequence: F54C8
  Identity: Version: 2
    Name: CGC_name: pir-2 Person_evidence: WBPerson481
      Sequence_name: F54C8.4
      Molecular_name: F54C8.4a
        F54C8.4a.1
        CE00190
        F54C8.4b
        CE45368
        F54C8.4b.1
      Other_name: CELE_F54C8.4 Accession_evidence: NDB BX284603
      Public_name: pir-2
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 Mar 2022 23:57:00 WBPerson51134 Name_change: CGC_name: pir-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pir
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation: 00008043
      00008044
      00008045
      00042341
      00042342
      00042343
      00117528
      00117529
      00117530
    Contained_in_operon: CEOP3580
    Ortholog: WBGene00055104 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00031572 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
      WBGene00153733 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00094839 Pristionchus pacificus From_analysis: OMA
      WBGene00270511 Caenorhabditis briggsae From_analysis: WormBase-Compara
      WBGene00224607 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5012 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6164 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g5704 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14110 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g3283 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g17728 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g15344 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g20066 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g22190 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g29490 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3359 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00808.g14279 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-F54C8.4 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp5_scaffold_00405.g10883 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_07418 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009425 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03840 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g16391 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30269700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8618 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245650 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00292305 Trichuris muris From_analysis: WormBase-Compara
      WBGene00292980 Trichuris muris From_analysis: WormBase-Compara
      WBGene00296344 Trichuris muris From_analysis: WormBase-Compara
      WBGene00298069 Trichuris muris From_analysis: WormBase-Compara
      WBGene00300055 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0062449 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            OrthoInspector
      ZFIN:ZDB-GENE-050417-226 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
      HGNC:3066 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            PhylomeDB
      MGI:1919352 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
      RGD:1307038 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
    Paralog: WBGene00000466 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00011967 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable polynucleotide 5'-phosphatase activity. Predicted to be involved in dephosphorylation. Expressed in AB and pharynx. Is an ortholog of human DUSP11 (dual specificity phosphatase 11). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F54C8.4a
      F54C8.4b
    Corresponding_transcript: F54C8.4a.1
      F54C8.4b.1
    Other_sequence (33)
    Associated_feature (2)
  Experimental_info: RNAi_result: WBRNAi00015587 Inferred_automatically: RNAi_primary
      WBRNAi00032756 Inferred_automatically: RNAi_primary
      WBRNAi00008217 Inferred_automatically: RNAi_primary
      WBRNAi00048262 Inferred_automatically: RNAi_primary
      WBRNAi00006022 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr176
      Expr1028923
      Expr1034371
      Expr1152064
      Expr2004123
      Expr2022347
    Drives_construct: WBCnstr00031719
    Construct_product: WBCnstr00031719
    Microarray_results (21)
    Expression_cluster (131)
    Interaction (32)
  Map_info: Map: III Position: 0.512575
    Positive: Positive_clone: F54C8 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00002809
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00064201
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene