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WormBase Tree Display for Gene: WBGene00008458

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Name Class

WBGene00008458SMapS_parentSequenceE02H1
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (18)
StrainWBStrain00037116
RNASeq_FPKM (74)
GO_annotation (21)
Contained_in_operonCEOP2436
OrthologWBGene00061486Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00024261Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00155911Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00156611Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00132507Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00108824Pristionchus pacificusFrom_analysisInparanoid_8
WBGene00231693Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g6150Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g9058Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g2160Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g192Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g1101Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g3055Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g1507Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3534Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15637Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g15941Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g3221Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01041.g15470Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-E02H1.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold50.g310Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_08380.g38659Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_08451Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_003699Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g18685Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20190300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g5539Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248058Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00259881Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00287594Trichuris murisFrom_analysisWormBase-Compara
SGD:S000002325Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0033754Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-040625-113Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
HGNC:49151Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:5510732Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
RGD:7387335Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00006391Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionE02H1.6 encodes an ortholog of human TAF9 (OMIM:600822; also known asAK6, adrenal gland protein AD-004 like protein, ADLP) and of S.cerevisiae Fap7p; like its human ortholog, E02H1.6 is nuclear, and ispredicted to likewise be a TATA box binding protein (TBP)-associatedfactor mediating activation of RNA polymerase II; E02H1.6 prefers ATPand dATP as phosphate donors; E02H1.6's biochemical activity is unusual,since it also prefers AMP and dAMP as substrates, and tolerates CMP, TMPand shikimate acid as substrates as well; since yeast Fap7p promotespre-rRNA cleavage, E02H1.6 may be multifunctional; in RNAi assays,E02H1.6 is required for normally fast growth; E02H1.6 is coexpressedwith pme-2 in an operon, and thus, like PME-2, may function in DNArepair.Paper_evidenceWBPaper00005600
WBPaper00027687
WBPaper00028896
WBPaper00028897
WBPaper00028898
WBPaper00028899
Curator_confirmedWBPerson567
Date_last_updated20 Feb 2007 00:00:00
Automated_descriptionPredicted to enable ATP binding activity and adenylate kinase activity. Predicted to be involved in nucleoside monophosphate phosphorylation and phosphorylation. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human AK6 (adenylate kinase 6).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSE02H1.6
Corresponding_CDS_historyE02H1.6:wp54
Corresponding_transcriptE02H1.6.1
Other_sequence (35)
Associated_featureWBsf221907
Experimental_infoRNAi_resultWBRNAi00007974Inferred_automaticallyRNAi_primary
WBRNAi00012646Inferred_automaticallyRNAi_primary
WBRNAi00065873Inferred_automaticallyRNAi_primary
WBRNAi00043602Inferred_automaticallyRNAi_primary
WBRNAi00030468Inferred_automaticallyRNAi_primary
Expr_patternExpr4325
Expr1020050
Expr1033684
Expr1147592
Expr2002134
Expr2020357
Drives_constructWBCnstr00011923
WBCnstr00032949
Construct_productWBCnstr00011923
WBCnstr00032949
AntibodyWBAntibody00001104
Microarray_results (19)
Expression_cluster (99)
Interaction (101)
Map_infoPositivePositive_cloneE02H1Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII1.61605
ReferenceWBPaper00027687
WBPaper00038491
WBPaper00041771
WBPaper00055090
WBPaper00065308
MethodGene