WormBase Tree Display for Gene: WBGene00007880

WBGene00007880 SMap: S_parent: Sequence: C33A12
  Identity: Version: 2
    Name: CGC_name: ndua-5 Person_evidence: WBPerson25803
            WBPerson545
      Sequence_name: C33A12.1
      Molecular_name: C33A12.1
        C33A12.1.1
        CE05347
      Other_name: CELE_C33A12.1 Accession_evidence: NDB BX284604
      Public_name: ndua-5
    DB_info: Database: AceView gene 4K286
        WormQTL gene WBGene00007880
        WormFlux gene WBGene00007880
        NDB locus_tag CELE_C33A12.1
        Panther gene CAEEL|WormBase=WBGene00007880|UniProtKB=Q18359
          family PTHR12653
        NCBI gene 177786
        RefSeq protein NM_069287.6
        SwissProt UniProtAcc Q18359
        TREEFAM TREEFAM_ID TF313785
        UniProt_GCRP UniProtAcc Q18359
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 Jan 2023 20:48:33 WBPerson51134 Name_change: CGC_name: ndua-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ndua
    Allele (23)
    Strain: WBStrain00002888
    RNASeq_FPKM (74)
    GO_annotation: 00061016
      00061017
      00061018
      00061019
      00061020
      00061021
      00061022
      00061023
      00061024
      00115881
    Ortholog: WBGene00070276 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00039123 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00075445 Caenorhabditis remanei From_analysis: TreeFam
            WormBase-Compara
      WBGene00164203 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00123359 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00190552 Caenorhabditis brenneri From_analysis: TreeFam
            WormBase-Compara
      WBGene00222790 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g7902 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g3653 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g18385 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21145 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g8109 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g19008 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g14694 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g851 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g26742 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g27309 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g17715 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00211.g7097 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-C33A12.1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g8215 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00668.g14223 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_10047 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013459 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09427 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g18006 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40342410 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11340 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248092 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00277085 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00259262 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00302931 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0047038 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050320-17 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:7688 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1915452 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:3155 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: C33A12.1 encodes the C. elegans ortholog of the NDUFA5/B13 subunit of the mitochondrial NADH dehydrogenase (ubiquinone) complex (complex I). Paper_evidence: WBPaper00005928
          Curator_confirmed: WBPerson1843
          Date_last_updated: 07 Nov 2006 00:00:00
      Automated_description: Predicted to be involved in respiratory electron transport chain. Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be part of mitochondrial respiratory chain complex I. Human ortholog(s) of this gene implicated in Alzheimer's disease. Is an ortholog of human NDUFA5 (NADH:ubiquinone oxidoreductase subunit A5). Paper_evidence: WBPaper00065943
          Curator_confirmed (2)
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:10652 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:7688)
  Molecular_info: Corresponding_CDS: C33A12.1
    Corresponding_transcript: C33A12.1.1
    Other_sequence (61)
    Associated_feature: WBsf652070
      WBsf997432
      WBsf997433
      WBsf1017971
      WBsf1017972
      WBsf1017973
      WBsf230585
  Experimental_info: RNAi_result (15)
    Expr_pattern: Chronogram1794
      Expr5405
      Expr1029208
      Expr1033412
      Expr1145739
      Expr2001329
      Expr2019552
    Drives_construct: WBCnstr00003407
      WBCnstr00033412
    Construct_product: WBCnstr00033412
    Microarray_results (19)
    Expression_cluster (116)
    Interaction (103)
  Map_info: Map: IV Position: 4.29053
    Positive: Positive_clone: C33A12 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005928
    WBPaper00031194
    WBPaper00038491
    WBPaper00041771
    WBPaper00049828
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene