WormBase Tree Display for Gene: WBGene00007786

WBGene00007786 SMap: S_parent: Sequence: C27H6
  Identity: Version: 2
    Name: CGC_name: rmd-2 Person_evidence: WBPerson2692
            WBPerson552
      Sequence_name: C27H6.4
      Molecular_name: C27H6.4a
        C27H6.4a.1
        CE08428
        C27H6.4b
        CE45113
        C27H6.4c
        CE42479
        C27H6.4b.1
        C27H6.4c.1
      Other_name: CELE_C27H6.4 Accession_evidence: NDB BX284605
      Public_name: rmd-2
    DB_info: Database: AceView gene 5K464
        WormQTL gene WBGene00007786
        WormFlux gene WBGene00007786
        NDB locus_tag CELE_C27H6.4
        Panther gene CAEEL|WormBase=WBGene00007786|UniProtKB=Q8MQB5
          family PTHR16056
        NCBI gene 179391
        RefSeq protein NM_171523.6
            NM_001129394.5
            NM_171522.7
        TREEFAM TREEFAM_ID TF315854
        TrEMBL UniProtAcc Q8MQB5
            B2D6P1
            P90762
        UniProt_GCRP UniProtAcc Q8MQB5
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Nov 2007 10:25:06 WBPerson2970 Name_change: CGC_name: rmd-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rmd
    Allele (34)
    Possibly_affected_by: WBVar02154061
    RNASeq_FPKM (74)
    GO_annotation: 00005821
      00005822
      00005823
      00005824
      00005825
      00005826
      00084529
    Ortholog: WBGene00070359 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038648 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00156673 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130543 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00222705 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1759 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g6009 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g9085 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g21479 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g19878 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP29.g19881 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g11829 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g8721 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g5092 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1047 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g25167 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g4023 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01082.g15631 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-rmd-2 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g15795 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00006.g408 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_20084 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016868 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00070 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02705 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02726 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g06136 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g12055 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g1501 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50262200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15391 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00243706 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00304622 Pristionchus pacificus From_analysis: WormBase-Compara
      WBGene00258405 Strongyloides ratti From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-041014-256 Danio rerio From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
            SonicParanoid
      HGNC:26567 Homo sapiens From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            Panther
      MGI:2147043 Mus musculus From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            Panther
            SonicParanoid
      RGD:1308697 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            Panther
            SonicParanoid
      RGD:1559836 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            OrthoFinder
            Panther
            SonicParanoid
    Paralog: WBGene00007190 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012976 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00012977 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00009369 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00011501 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00015855 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018125 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00020711 Caenorhabditis elegans From_analysis: TreeFam
      WBGene00020070 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable microtubule binding activity. Predicted to be located in mitochondrion; mitotic spindle pole; and spindle microtubule. Is an ortholog of human RMDN2 (regulator of microtubule dynamics 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS (3)
    Corresponding_CDS_history: C27H6.4:wp82
      C27H6.4b:wp215
    Corresponding_transcript: C27H6.4a.1
      C27H6.4b.1
      C27H6.4c.1
    Other_sequence (70)
    Associated_feature: WBsf652954
      WBsf652955
      WBsf1001030
      WBsf1001031
      WBsf1020252
  Experimental_info: RNAi_result: WBRNAi00041383 Inferred_automatically: RNAi_primary
      WBRNAi00081133 Inferred_automatically: RNAi_primary
      WBRNAi00011282 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022284
      Expr1033379
      Expr1145417
      Expr2015371
      Expr2033605
    Drives_construct: WBCnstr00033483
    Construct_product: WBCnstr00033483
    Microarray_results (32)
    Expression_cluster (121)
    Interaction: WBInteraction000250493
      WBInteraction000551421
      WBInteraction000571076
      WBInteraction000571116
      WBInteraction000576556
      WBInteraction000577838
      WBInteraction000580558
  Map_info: Map: V Position: 2.22625 Error: 0.000679
    Positive: Positive_clone: C27H6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034662
    WBPaper00038491
    WBPaper00055090
    WBPaper00056909
    WBPaper00061639
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene