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WormBase Tree Display for Gene: WBGene00007139

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Name Class

WBGene00007139SMapS_parentSequenceB0285
IdentityVersion2
NameCGC_namemnp-1Paper_evidenceWBPaper00031840
Person_evidenceWBPerson2244
WBPerson237
Sequence_nameB0285.7
Molecular_nameB0285.7
B0285.7.1
CE00646
Other_nameCELE_B0285.7Accession_evidenceNDBBX284603
Public_namemnp-1
DB_infoDatabaseAceViewgene3F453
WormQTLgeneWBGene00007139
WormFluxgeneWBGene00007139
NDBlocus_tagCELE_B0285.7
PanthergeneCAEEL|WormBase=WBGene00007139|UniProtKB=P46557
familyPTHR11533
NCBIgene175564
RefSeqproteinNM_065477.6
SwissProtUniProtAccP46557
UniProt_GCRPUniProtAccP46557
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:47WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 May 2008 10:32:24WBPerson2970Name_changeCGC_namemnp-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classmnp
Allele (100)
StrainWBStrain00002163
WBStrain00032571
WBStrain00055655
RNASeq_FPKM (74)
GO_annotation00046355
00046356
00046357
00046358
00046359
00046360
OrthologWBGene00037574Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00142697Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00061794Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WormBase-Compara
CBOVI.g5883Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2169Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g5649Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g20523Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g16757Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g9759Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g4904Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3313Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15112Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g21288Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g25196Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g29517Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g849Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g18595Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g20748Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00006.g479Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-mnp-1Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21929Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g21944Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01767.g23010Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_07330.g37637Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_14981Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010117Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g03601Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g504Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30076110Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g7430Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00128729Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00114970Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00263278Strongyloides rattiFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptionmnp-1 encodes a protein related to the M1 family of metalloproteinases, but whose sequence indicates that it is unlikely to be catalytically active (MNP-1 lacks three of the four essential zinc-binding amino acids); during embryonic development mnp-1 activity is required, likely cell autonomously, for migration of muscle cells from their lateral positions to their final positions close to the dorsal and ventral midlines and for proper body morphology; an MNP-1::GFP reporter fusion localizes to the plasma membrane and is expressed from the 400-cell stage of embryogenesis through the early first larval stage in body-wall muscle, the Z1 and Z4 somatic gonad precursors, and cells in the dorsal anterior region that are likely to be neuronal precursors.Paper_evidenceWBPaper00031840
Curator_confirmedWBPerson1843
Date_last_updated05 May 2008 00:00:00
Automated_descriptionPredicted to be located in cytoplasm. Expressed in Z1; Z4; body wall musculature; neuroblasts; and neurons.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0285.7
Corresponding_transcriptB0285.7.1
Other_sequenceCJC04433_1
CR03904
CRC09344_1
Associated_feature (14)
Experimental_infoRNAi_result (11)
Expr_patternChronogram1270
Expr5040
Expr12667
Expr13910
Expr1013645
Expr1033073
Expr1143065
Expr2013632
Expr2031866
Drives_constructWBCnstr00002922
WBCnstr00022733
WBCnstr00022734
WBCnstr00033970
WBCnstr00040241
Construct_productWBCnstr00022733
WBCnstr00033970
WBCnstr00040241
Microarray_results (22)
Expression_cluster (230)
Interaction (128)
Map_infoMapIIIPosition-3.18292Error0.000721
PositivePositive_cloneB0285Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00031840
WBPaper00050854
WBPaper00065732
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene