WormBase Tree Display for Gene: WBGene00006715

WBGene00006715 SMap: S_parent: Sequence: F40G9
  Identity: Version: 1
    Name: CGC_name: ubc-20 Person_evidence: WBPerson89
      Sequence_name: F40G9.3
      Molecular_name: F40G9.3
        F40G9.3.1
        CE19850
      Other_name: CELE_F40G9.3 Accession_evidence: NDB BX284603
      Public_name: ubc-20
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ubc
    Allele (82)
    Strain: WBStrain00002957
    RNASeq_FPKM (74)
    GO_annotation: 00097844
      00097845
      00097846
      00097847
      00097848
      00097849
      00097850
      00097851
      00097852
    Contained_in_operon: CEOP3016
    Ortholog: WBGene00065359 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00035871 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
      WBGene00145973 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00070616 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00124046 Caenorhabditis japonica From_analysis: Inparanoid_8
      WBGene00104858 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00233983 Brugia malayi From_analysis: WormBase-Compara
      CSP29.g22559 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10917 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9665 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP39.g5186 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g1625 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00145.g5548 Caenorhabditis angaria From_analysis: WormBase-Compara
      FL83_18631 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_011802 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05009 Oscheius tipulae From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g14211 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_30325200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g6732 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00245916 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258947 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291186 Trichuris muris From_analysis: WormBase-Compara
      WBGene00300769 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000002584 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0015321 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-980605-9 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050320-48 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:4914 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1858216 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1311626 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Paralog (19)
    Structured_description: Automated_description: Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Predicted to be located in nucleus. Is an ortholog of human UBE2K (ubiquitin conjugating enzyme E2 K). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F40G9.3
    Corresponding_transcript: F40G9.3.1
    Other_sequence (56)
    Associated_feature: WBsf644906
      WBsf658543
      WBsf991002
      WBsf1014024
      WBsf224344
      WBsf224345
      WBsf224346
  Experimental_info: RNAi_result (18)
    Expr_pattern: Expr6019
      Expr1010829
      Expr1032798
      Expr1150780
      Expr2017707
      Expr2035845
    Drives_construct: WBCnstr00003463
    Microarray_results (19)
    Expression_cluster (88)
    Interaction (109)
  Map_info: Map: III Position: -26.9218 Error: 0.00178
    Positive: Positive_clone: F40G9 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (12)
  Remark (2)
  Method: Gene