WormBase Tree Display for Gene: WBGene00004495

WBGene00004495 SMap: S_parent: Sequence: F39B2
  Identity: Version: 1
    Name: CGC_name: rps-26
      Sequence_name: F39B2.6
      Molecular_name: F39B2.6
        F39B2.6.1
        CE16012
      Other_name: CELE_F39B2.6 Accession_evidence: NDB BX284601
      Public_name: rps-26
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rps
    Allele (23)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rps26 using blastP
    RNASeq_FPKM (74)
    GO_annotation (18)
    Ortholog: WBGene00061183 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00038931 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00144575 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00142204 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00112646 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00119611 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224191 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g12045 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g5307 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g2194 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g8221 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g21285 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g12526 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g3905 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g7796 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g1148 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7351 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00072.g3415 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-rps-26 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20962 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_01269.g19721 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_19315 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_003588 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05644 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3705 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_10012300 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrI_pilon.g2961 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237200 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262502 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00296908 Trichuris muris From_analysis: WormBase-Compara
      WBGene00300737 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000003157 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000000933 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0261597 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-8606 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1706 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:10414 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:31817 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1351628 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:621044 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1565117 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1562415 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1559808 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1582959 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2321949 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2319323 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:2324748 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            Panther
            PhylomeDB
    Structured_description: Concise_description: rps-26 encodes a small ribosomal subunit S26 protein; by homology, RPS-26 is predicted to function in protein biosynthesis; in C. elegans, RPS-26 activity is required for embryonic, larval, and germline development, as well as normal locomotion and body morphology. Paper_evidence: WBPaper00004402
            WBPaper00004540
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable mRNA binding activity. Predicted to be a structural constituent of ribosome. Involved in determination of adult lifespan. Predicted to be located in cytoplasmic side of rough endoplasmic reticulum membrane. Predicted to be part of cytosolic small ribosomal subunit and polysomal ribosome. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 10. Is an ortholog of human RPS26 (ribosomal protein S26). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0111888 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10414)
  Molecular_info: Corresponding_CDS: F39B2.6
    Corresponding_transcript: F39B2.6.1
    Other_sequence (289)
    Associated_feature: WBsf643857
      WBsf643858
      WBsf654839
      WBsf981146
      WBsf986223
      WBsf218825
      WBsf218826
      WBsf218827
  Experimental_info (5)
  Map_info: Map: I Position: 26.7678 Error: 0.026862
    Positive: Positive_clone: F39B2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00006475
    WBPaper00006510
    WBPaper00028564
    WBPaper00029008
    WBPaper00035215
    WBPaper00038491
    WBPaper00049531
    WBPaper00049828
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene