WormBase Tree Display for Gene: WBGene00004483

WBGene00004483 SMap: S_parent: Sequence: F37C12
  Identity: Version: 1
    Name: CGC_name: rps-14
      Sequence_name: F37C12.9
      Molecular_name: F37C12.9
        F37C12.9.1
        CE00821
      Other_name: CELE_F37C12.9 Accession_evidence: NDB BX284603
      Public_name: rps-14
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:35 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rps
    Allele (15)
    Legacy_information: Orthologous to yeast (S.cerevisiae) ribosomal protein rps14 using blastP
    RNASeq_FPKM (74)
    GO_annotation (17)
    Ortholog: WBGene00054713 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00030159 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00146938 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00130167 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00103896 Pristionchus pacificus From_analysis: Inparanoid_8
      WBGene00233982 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g5653 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g244 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g4660 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g16433 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g23897 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1296 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g9759 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g4716 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g687 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g16164 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_01078.g15611 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_14829.g24808 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-rps-14 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold489.g2045 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00350.g9922 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_22007 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_009834 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g11617 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g3255 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_30239900 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIII_pilon.g8095 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244737 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00261950 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00286649 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000000627 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      SGD:S000003727 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0004403 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0004404 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-030131-8631 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:10387 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:98107 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:62025 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:41088749 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
    Paralog: WBGene00012244 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Concise_description: rps-14 encodes a small ribosomal subunit S14 protein; by homology, RPS-14 is predicted to function in protein biosynthesis; in C. elegans, RPS-14 activity is required for embryonic and germline development, as well as the overall health of the animal; RPS-14 co-immuoprecipitates with ALG-1, a C. elegans Argonaut ortholog. Paper_evidence: WBPaper00004403
            WBPaper00005654
            WBPaper00034755
          Curator_confirmed: WBPerson1843
          Date_last_updated: 03 Sep 2012 00:00:00
      Automated_description: Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal small subunit assembly and translation. Predicted to be located in cytoplasm; nucleolus; and ribosome. Predicted to be part of cytosolic small ribosomal subunit and small-subunit processome. Expressed in tail. Human ortholog(s) of this gene implicated in chromosome 5q deletion syndrome. Is an ortholog of human RPS14 (ribosomal protein S14). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0090016 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:10387)
  Molecular_info: Corresponding_CDS: F37C12.9
    Corresponding_transcript: F37C12.9.1
    Other_sequence (333)
    Associated_feature: WBsf651179
      WBsf667044
      WBsf667045
      WBsf226924
  Experimental_info: RNAi_result (28)
    Expr_pattern: Expr5983
      Expr1015336
      Expr1032286
      Expr1150501
      Expr2015508
      Expr2033743
    Drives_construct: WBCnstr00002450
      WBCnstr00035450
    Construct_product: WBCnstr00035450
    Microarray_results (21)
    Expression_cluster (175)
    Interaction (238)
  Map_info: Map: III Position: -0.776434 Error: 0.00013
    Positive: Positive_clone: F37C12 Inferred_automatically (2)
    Pseudo_map_position
  Reference: WBPaper00005356
    WBPaper00028564
    WBPaper00034755
    WBPaper00035149
    WBPaper00035215
    WBPaper00038491
    WBPaper00049828
    WBPaper00055090
    WBPaper00060474
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene