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WormBase Tree Display for Gene: WBGene00004020

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Name Class

WBGene00004020SMapS_parentSequenceEGAP2
IdentityVersion1
NameCGC_namepho-1Person_evidenceWBPerson411
Sequence_nameEGAP2.3
Molecular_name (3)
Other_nameCELE_EGAP2.3Accession_evidenceNDBBX284602
Public_namepho-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classpho
Allele (44)
Legacy_information[C.elegansII] ca101 : electrophoretic variant in major acidphosphatase, no other phenotype. NA1. Purified protein is homodimeric glycoprotein,55kD subunit; activity detected at luminal edge of most gut cells, but not 6 most anterior. [Beh et al. 1991; JM]
[Beh CT, McGhee JD] ca101 leads to electrophoretic variant in major acid phosphatase, no other phenotype. NA1. Purified protein is homodimeric glycoprotein, 55kD subunit, activity detected at luminal edge of most gut cells, but not 6 most anterior.
StrainWBStrain00022680
WBStrain00022679
WBStrain00022681
RNASeq_FPKM (74)
GO_annotation00063393
00063394
00063395
00063396
00063397
00063398
00063399
00063400
OrthologWBGene00057407Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00025424Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00091553Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00121686Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00194260Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00091544Pristionchus pacificusFrom_analysisOMA
WormBase-Compara
WBGene00222679Brugia malayiFrom_analysisWormBase-Compara
CSP26.g11806Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1293Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17368Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g24419Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2206Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g7396Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g10215Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
Csp11.Scaffold629.g15947Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_01126.g18589Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_005979Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g1186Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g17823Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g2930Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g8270Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_20098800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrII_pilon.g4452Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00247099Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00091550Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280739Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00268121Strongyloides rattiFrom_analysisWormBase-Compara
Paralog (23)
Structured_descriptionConcise_descriptionpho-1 encodes the major C. elegans intestinal acid phosphatase; PHO-1 may function redundantly with other acid phosphatases; PHO-1 intestinal expression appears to be positively regulated by CKI-1, a cyclin-dependent kinase inhibitor, and negatively regulated by POP-1, a TCF/LEF transcription factor; PHO-1 is expressed along the intestinal brush border in all gut cells except the most anterior int-1 and int-2 cells, beginning at the three-fold stage of embryogenesis.Paper_evidenceWBPaper00001454
WBPaper00005295
WBPaper00017091
Curator_confirmedWBPerson1843
Date_last_updated27 Mar 2014 00:00:00
Automated_descriptionPredicted to enable phosphatase activity. Predicted to be involved in dephosphorylation. Located in membrane raft. Expressed in intestine. Used to study obesity.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:9970Homo sapiensPaper_evidenceWBPaper00061889
Curator_confirmedWBPerson324
Date_last_updated28 Jun 2022 00:00:00
Models_disease_in_annotationWBDOannot00001252
Molecular_infoCorresponding_CDSEGAP2.3
Corresponding_transcriptEGAP2.3.1
Other_sequence (29)
Associated_featureWBsf650050
WBsf650051
WBsf665523
WBsf982352
WBsf982353
WBsf223018
WBsf223019
WBsf223020
WBsf223021
Experimental_infoRNAi_result (18)
Expr_patternExpr3212
Expr1027207
Expr1031925
Expr1147694
Expr2014906
Expr2033142
Drives_constructWBCnstr00000345
WBCnstr00035738
Construct_productWBCnstr00035738
Microarray_results (20)
Expression_cluster (259)
Interaction (67)
Map_infoMapIIPosition-1.84291Error0.018889
PositivePositive_cloneEGAP2Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_data2_point7072
7073
7074
Multi_point3635
3636
5004
5035
Reference (19)
RemarkData extracted from Beh et al. (1991)
Sequence connection from [McGhee JD]
MethodGene