WormBase Tree Display for Gene: WBGene00002163
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WBGene00002163 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ist-1 | Person_evidence | WBPerson545 | |||||
Sequence_name | C54D1.3 | ||||||||
Molecular_name (12) | |||||||||
Other_name | CELE_C54D1.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | ist-1 | ||||||||
DB_info | Database | AceView | gene | XH757 | |||||
WormQTL | gene | WBGene00002163 | |||||||
WormFlux | gene | WBGene00002163 | |||||||
NDB | locus_tag | CELE_C54D1.3 | |||||||
NCBI | gene | 180978 | |||||||
RefSeq | protein | NM_001330903.3 | |||||||
NM_001373346.3 | |||||||||
NM_001373345.2 | |||||||||
NM_076800.7 | |||||||||
TrEMBL | UniProtAcc | A0A4V0IIP8 | |||||||
A0A4V0INB3 | |||||||||
Q18820 | |||||||||
A0A1C3NSK8 | |||||||||
UniProt_GCRP | UniProtAcc | A0A4V0IIP8 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:26 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 01 Jul 2016 14:56:15 | WBPerson1983 | Event | Acquires_merge | WBGene00044576 | ||||
Acquires_merge | WBGene00044576 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ist | ||||||||
Allele (233) | |||||||||
Strain | WBStrain00033295 | ||||||||
WBStrain00037950 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00062458 | ||||||||
00062459 | |||||||||
00062460 | |||||||||
00062461 | |||||||||
00062462 | |||||||||
00062463 | |||||||||
Ortholog | WBGene00051378 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00032200 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00148607 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00134877 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00096505 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
WormBase-Compara | |||||||||
WBGene00223187 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
CBOVI.g3826 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP21.g1829 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
CSP26.g9003 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g20049 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g2804 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP31.g20596 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP32.g5616 | Caenorhabditis sulstoni | From_analysis | WormBase-Compara | ||||||
CSP38.g20607 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
CSP39.g7693 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g2188 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cang_2012_03_13_00086.g3908 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
Cni-ist-1 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold578.g4499 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_00059.g2900 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_00235 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_024710 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
OTIPU.nOt.2.0.1.g01393 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
Sp34_X0200110 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrX_pilon.g19354 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00239652 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
WBGene00240370 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
ZFIN:ZDB-GENE-130530-591 | Danio rerio | From_analysis | OrthoFinder | ||||||
OrthoInspector | |||||||||
Structured_description | Concise_description | ist-1 encodes a pleckstrin homology (PH) and phosphotyrosine binding (PTB) domain-containing insulin receptor substrate (IRS) homolog that negatively regulates lifespan and dauer development; IST-1 potentiates insulin-like signaling, although it is not absolutely required for such signaling under most conditions; in addition to acting through the AGE-1/PI3K branch of the insulin-like signaling pathway, IST-1 may also function in a parallel pathway to activate downstream protein-kinase Bs encoded by akt-1 and akt-2. | Paper_evidence | WBPaper00005614 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to enable insulin receptor binding activity; phosphatidylinositol 3-kinase binding activity; and transmembrane receptor protein tyrosine kinase adaptor activity. Involved in dauer larval development; insulin receptor signaling pathway; and short-term memory. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (5) | |||||||||
Experimental_info | RNAi_result (12) | ||||||||
Expr_pattern | Expr1012662 | ||||||||
Expr1025581 | |||||||||
Expr1031266 | |||||||||
Expr1146049 | |||||||||
Expr1147097 | |||||||||
Expr2012871 | |||||||||
Expr2031105 | |||||||||
Drives_construct (2) | |||||||||
Construct_product | WBCnstr00023456 | ||||||||
WBCnstr00036412 | |||||||||
Microarray_results (28) | |||||||||
Expression_cluster (196) | |||||||||
Interaction (12) | |||||||||
Map_info | Map | X | Position | -1.82954 | Error | 0.004648 | |||
Positive | Positive_clone | C54D1 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Sequence connection from [Wolkow C] | ||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |