WormBase Tree Display for Gene: WBGene00002021

WBGene00002021 SMap: S_parent: Sequence: F52E1
  Identity: Version: 1
    Name: CGC_name: hsp-17 Person_evidence: WBPerson36
      Sequence_name: F52E1.7
      Molecular_name: F52E1.7a
        F52E1.7a.1
        CE04635
        F52E1.7b
        CE35323
        F52E1.7b.1
      Other_name: CELE_F52E1.7 Accession_evidence: NDB BX284605
      Public_name: hsp-17
    DB_info: Database: AceView gene 5I862
        WormQTL gene WBGene00002021
        WormFlux gene WBGene00002021
        NDB locus_tag CELE_F52E1.7
        Panther gene CAEEL|WormBase=WBGene00002021|UniProtKB=Q20660
          family PTHR45640
        NCBI gene 186113
        RefSeq protein NM_001028786.8
            NM_001028787.7
        TrEMBL UniProtAcc Q7JP52
            Q20660
        UniProt_GCRP UniProtAcc Q20660
        OMIM gene 123580
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:26 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hsp
    Allele (19)
    Strain: WBStrain00034982
      WBStrain00034983
    RNASeq_FPKM (74)
    GO_annotation: 00068721
      00068722
      00068723
      00068724
      00068725
    Ortholog: WBGene00053071 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032413 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00147232 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00101797 Pristionchus pacificus From_analysis: OMA
      WBGene00230858 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g1602 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g723 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g20566 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g14580 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g5628 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g10580 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g5288 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g19823 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g4135 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g8810 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g8811 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g8812 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g8813 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g8836 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP38.g8837 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g17274 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2884 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00179.g6331 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cang_2012_03_13_00321.g9157 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-hsp-17 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g22276 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02321.g25966 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_17042 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018831 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g05216 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g23548 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50111700 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g14976 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00242922 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257172 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00258269 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00261443 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00265334 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00265338 Strongyloides ratti From_analysis: WormBase-Compara
      FB:FBgn0011296 Drosophila melanogaster From_analysis: Hieranoid
            OrthoInspector
            Panther
      FB:FBgn0035817 Drosophila melanogaster From_analysis: Inparanoid
            OMA
            Panther
      FB:FBgn0001229 Drosophila melanogaster From_analysis: OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0001225 Drosophila melanogaster From_analysis: Hieranoid
            OrthoInspector
            Panther
            SonicParanoid
      FB:FBgn0001226 Drosophila melanogaster From_analysis: Hieranoid
            OrthoInspector
            Panther
            SonicParanoid
      ZFIN:ZDB-GENE-020508-1 Danio rerio From_analysis: Hieranoid
            OMA
            Panther
            SonicParanoid
      HGNC:2388 Homo sapiens From_analysis: Hieranoid
            OMA
            Panther
      HGNC:CRYAA2 Homo sapiens From_analysis: Hieranoid
            OMA
            Panther
      MGI:88515 Mus musculus From_analysis: Hieranoid
            Inparanoid
            Panther
      MGI:88516 Mus musculus From_analysis: Hieranoid
            Inparanoid
            Panther
      RGD:2414 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            Panther
      RGD:621554 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            Panther
    Paralog (17)
    Structured_description: Concise_description: hsp-17 encodes a heat shock protein that is a member of the hsp16/hsp20/alpha-crystallin family of heat shock proteins; by homology, HSP-17 is predicted to function as a molecular chaperone that protects cells from heat-induced protein aggregation and denaturation. Curator_confirmed: WBPerson1843
          Date_last_updated: 25 Mar 2014 00:00:00
      Automated_description: Predicted to enable unfolded protein binding activity. Predicted to be involved in protein refolding and response to heat. Predicted to be located in cytoplasm and nucleus. Expressed in excretory cell. Human ortholog(s) of this gene implicated in cataract 9 multiple types. Is an ortholog of human CRYAA (crystallin alpha A). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0110266 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:2388)
  Molecular_info: Corresponding_CDS: F52E1.7a
      F52E1.7b
    Corresponding_transcript (2)
    Other_sequence (51)
    Associated_feature: WBsf234078
  Experimental_info: RNAi_result: WBRNAi00032621 Inferred_automatically: RNAi_primary
      WBRNAi00113308 Inferred_automatically: RNAi_primary
      WBRNAi00106386 Inferred_automatically: RNAi_primary
      WBRNAi00047988 Inferred_automatically: RNAi_primary
      WBRNAi00113079 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr15509
      Expr1021825
      Expr1151803
      Expr1200266
      Expr1200267
      Expr2012622
      Expr2030858
    Drives_construct: WBCnstr00036515
      WBCnstr00042200
    Construct_product (2)
    Antibody: WBAntibody00002863
      WBAntibody00002889
    Microarray_results (22)
    Expression_cluster (279)
    Interaction (117)
  Map_info: Map: V Position: 1.36669 Error: 0.004297
    Positive: Positive_clone: F52E1 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4368
    Pseudo_map_position
  Reference (20)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene