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WormBase Tree Display for Gene: WBGene00002017

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Name Class

WBGene00002017SMapS_parentSequenceT27E4
IdentityVersion1
NameCGC_namehsp-16.11Person_evidenceWBPerson36
Sequence_nameT27E4.2
Molecular_nameT27E4.2
T27E4.2.1
CE14249
Other_namehsp-16
CELE_T27E4.2Accession_evidenceNDBBX284605
Public_namehsp-16.11
DB_infoDatabaseAceViewgene5J571
WormFluxgeneWBGene00002017
NDBlocus_tagCELE_T27E4.2
NCBIgene179289
RefSeqproteinNM_072956.4
SwissProtUniProtAccP34696
UniProt_GCRPUniProtAccP34696
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhsp
AlleleWBVar01499903
WBVar01500129
WBVar01499419
WBVar01499420
WBVar01499056
WBVar01499249
WBVar00250229
WBVar01499316
In_clusterHSP16A
RNASeq_FPKM (74)
GO_annotation (3)
OrthologWBGene00038447Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00052626Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00027233Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00027247Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WormBase-Compara
WBGene00038449Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WBGene00073756Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00068604Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00068609Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00073751Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00107977Pristionchus pacificusFrom_analysisOMA
WBGene00131763Caenorhabditis japonicaFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00145968Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00143292Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00160093Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00135524Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00073750Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00066180Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00101797Pristionchus pacificusFrom_analysisOMA
WBGene00144127Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00150606Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00226306Brugia malayiFrom_analysisWormBase-Compara
WBGene00226851Brugia malayiFrom_analysisWormBase-Compara
WBGene00236790Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12731Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12775Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12782Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12786Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12861Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g15081Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5546Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5548Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4575Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17963Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18639Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g5548Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27284Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10285Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14652Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14656Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14876Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g16155Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g6664Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g22418Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8372Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17874Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g21398Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23638Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g20089Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20528Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20544Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g16840Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19837Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00279.g8579Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01089.g18310Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19098Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_24821Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017210Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_017215Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_018405Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10224Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_10087100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50235500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50235900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50330000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50355000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50355500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50355600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50359300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g15161Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00208133Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00236859Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257141Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257259Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258086Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261172Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265225Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265337Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288111Trichuris murisFrom_analysisWormBase-Compara
WBGene00289300Trichuris murisFrom_analysisWormBase-Compara
WBGene00294628Trichuris murisFrom_analysisWormBase-Compara
WBGene00294630Trichuris murisFrom_analysisWormBase-Compara
WBGene00296278Trichuris murisFrom_analysisWormBase-Compara
WBGene00296279Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0011296Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001229Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001227Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001224Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
Panther
FB:FBgn0001223Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
Panther
ZFIN:ZDB-GENE-020508-1Danio rerioFrom_analysisEnsEMBL-Compara
OMA
Panther
RGD:2413Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
Paralog (17)
Structured_descriptionConcise_descriptionhsp-16.11 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins, and that is identical to the protein encoded by hsp-16.1; hsp-16.11 expression is induced in response to heat shock or other environmental stresses; HSP-16.11 is likely to function as passive ligand temporarily preventing unfolded proteins from aggregating; HSP-16.11 has been shown to interact with intracellular human beta amyloid peptide, a primary component of the extracellular plaques found in Alzheimer's disease.Paper_evidenceWBPaper00002665
WBPaper00004424
WBPaper00005371
WBPaper00013029
WBPaper00013239
WBPaper00013280
Curator_confirmedWBPerson1843
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable unfolded protein binding activity. Involved in endoplasmic reticulum unfolded protein response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST27E4.2
Corresponding_transcriptT27E4.2.1
Other_sequence (30)
Associated_featureWBsf232206
WBsf232207
Experimental_infoRNAi_result (18)
Expr_patternExpr1024602
Expr1157856
Expr2012616
Expr2030852
Drives_constructWBCnstr00036519
Construct_productWBCnstr00036519
AntibodyWBAntibody00001859
Microarray_resultsSMD_T27E4.2
Expression_cluster (208)
Interaction (24)
Map_infoMapVPosition1.93302Error0.00282
PositivePositive_cloneT27E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (51)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene