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WormBase Tree Display for Gene: WBGene00001534

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Name Class

WBGene00001534SMapS_parentSequenceF52E1
Identity (6)
Gene_infoBiotypeSO:0001217
Gene_classgcy
Allele (42)
Legacy_information[Yu S] gcy for Guanylyl CYclase. No mutations known. gcy-7::GFP expressed asymmetrically, in ASEL, not ASER. Predicted gene F52E1.4
StrainWBStrain00029301
WBStrain00029312
WBStrain00029361
WBStrain00029468
WBStrain00029503
RNASeq_FPKM (74)
GO_annotation (27)
OrthologWBGene00053072Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00024177Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00024179Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00024180Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00026663Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00027182Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00027989Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00028819Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00031141Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00031858Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00032412Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00036817Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00041820Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00148616Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00192155Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00122590Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00089984Pristionchus pacificusFrom_analysisOMA
CBOVI.g375Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g13781Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g20565Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g8849Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g5627Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g26220Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g5289Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g17273Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g9844Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g2883Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00870.g14658Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g16638Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g22277Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_02321.g25967Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_17041Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_018832Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07264Oscheius tipulaeFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g12896Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g7764Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g7766Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_50068400Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50111810Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g14977Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00091763Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102264Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279802Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00257442Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257745Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264401Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264500Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264501Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264502Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264540Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265036Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265190Strongyloides rattiFrom_analysisWormBase-Compara
RGD:621853Rattus norvegicusFrom_analysisOMA
OrthoInspector
Panther
Paralog (37)
Structured_descriptionConcise_descriptiongcy-7 encodes a membrane guanylyl cyclase; a gcy-7::gfp reporter is expressed asymmetrically in the ASEL sensory neuron.Paper_evidenceWBPaper00002846
Curator_confirmedWBPerson1843
Date_last_updated09 Nov 2007 00:00:00
Automated_descriptionPredicted to enable adenylate cyclase activity; guanylate cyclase activity; and peptide receptor activity. Involved in chemosensory behavior; chemotaxis; and response to magnesium ion. Located in cilium. Expressed in ASEL.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF52E1.4a
F52E1.4b
F52E1.4c
Corresponding_CDS_historyF52E1.4:wp107
Corresponding_transcriptF52E1.4a.1
F52E1.4b.1
F52E1.4c.1
Other_sequence (13)
Associated_featureWBsf047571
WBsf047574
WBsf047575
WBsf047576
WBsf047577
WBsf047578
WBsf232102
Experimental_infoRNAi_resultWBRNAi00095445Inferred_automaticallyRNAi_primary
WBRNAi00015412Inferred_automaticallyRNAi_primary
WBRNAi00032619Inferred_automaticallyRNAi_primary
WBRNAi00047985Inferred_automaticallyRNAi_primary
Expr_patternExpr240
Expr1028077
Expr1151801
Expr2012003
Expr2030239
Marker13
Drives_construct (14)
Construct_productWBCnstr00036880
Microarray_results (22)
Expression_cluster (52)
Interaction (46)
Map_infoMapVPosition1.37407Error0.004189
PositivePositive_cloneF52E1Person_evidenceWBPerson4049
Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4596
Pseudo_map_position
Reference (51)
RemarkData extracted from Yu et al. (1997)
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene