WormBase Tree Display for Gene: WBGene00000677

WBGene00000677 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F56B3
  Identity: Version: 1
    Name: CGC_name: col-103 Person_evidence: WBPerson345
      Sequence_name: F56B3.1
      Molecular_name: F56B3.1
        F56B3.1.1
        CE17882
      Other_name: CELE_F56B3.1 Accession_evidence: NDB BX284604
      Public_name: col-103
    DB_info: Database (10)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (35)
    RNASeq_FPKM (74)
    GO_annotation: 00033904
      00033905
      00107671
    Ortholog: WBGene00068377 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00032009 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00126988 Caenorhabditis japonica From_analysis: OMA
            Inparanoid_8
      WBGene00163006 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00072495 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00228353 Brugia malayi From_analysis: WormBase-Compara
      CSP28.g10770 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g7483 Caenorhabditis becei From_analysis: WormBase-Compara
      GCK72_002738 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g09661 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g5584 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_20288400 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g9563 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00237999 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00257298 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00260700 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00262681 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00288383 Trichuris muris From_analysis: WormBase-Compara
      ZFIN:ZDB-GENE-030131-3430 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
      ZFIN:ZDB-GENE-110411-119 Danio rerio From_analysis: EnsEMBL-Compara
            Inparanoid
    Paralog (170)
    Structured_description: Concise_description: col-103 encodes a collagen. Curator_confirmed: WBPerson1843
          Date_last_updated: 04 Jan 2013 00:00:00
      Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F56B3.1
    Corresponding_transcript: F56B3.1.1
    Other_sequence (40)
    Associated_feature: WBsf651629
      WBsf981663
      WBsf995269
      WBsf229715
  Experimental_info (7)
  Map_info: Map: IV Position: -23.5229 Error: 0.006013
    Positive: Positive_clone: F56B3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00041771
    WBPaper00063926
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene