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WormBase Tree Display for Gene: WBGene00000136

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Name Class

WBGene00000136SMapS_parentSequenceC05E11
IdentityVersion1
NameCGC_nameamt-4
Sequence_nameC05E11.5
Molecular_nameC05E11.5
C05E11.5.1
CE44951
Other_nameCELE_C05E11.5Accession_evidenceNDBBX284606
Public_nameamt-4
DB_infoDatabaseAceViewgeneXF187
WormQTLgeneWBGene00000136
WormFluxgeneWBGene00000136
NDBlocus_tagCELE_C05E11.5
PanthergeneCAEEL|WormBase=WBGene00000136|UniProtKB=Q17663
familyPTHR11730
NCBIgene180728
RefSeqproteinNM_076382.6
TREEFAMTREEFAM_IDTF313588
TrEMBLUniProtAccQ17663
UniProt_GCRPUniProtAccQ17663
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:20WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classamt
Allele (121)
StrainWBStrain00031865
RNASeq_FPKM (74)
GO_annotation (11)
OrthologWBGene00034965Caenorhabditis briggsaeFrom_analysisHillier-set
OMA
WormBase-Compara
WBGene00034967Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WormBase-Compara
WBGene00034968Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00077849Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00131046Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00141620Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00150230Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00193129Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00125266Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00053867Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00074499Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00076341Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00062709Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00119748Caenorhabditis japonicaFrom_analysisTreeFam
WBGene00143701Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00225410Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g2708Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g11328Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g10922Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g19105Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15487Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g8969Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g8430Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g17674Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g26672Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g12447Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00221.g7304Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g24131Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold622.g6266Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00006.g459Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_00647Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_024282Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g07067Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g1326Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g1328Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0253810Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g18935Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00248020Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00266562Strongyloides rattiFrom_analysisWormBase-Compara
SGD:S000003353Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
SGD:S000005086Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
SGD:S000006342Saccharomyces cerevisiaeFrom_analysisEnsEMBL-Compara
Inparanoid
OrthoFinder
OrthoInspector
SonicParanoid
ParalogWBGene00000133Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000134Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000135Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00004358Caenorhabditis elegansFrom_analysisPanther
WBGene00004359Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionConcise_descriptionamt-4 encodes a member of the ammonium transporter protein family.Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable ammonium transmembrane transporter activity. Predicted to be involved in ammonium homeostasis and ammonium transmembrane transport. Predicted to be located in plasma membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC05E11.5
Corresponding_CDS_historyC05E11.5:wp214
Corresponding_transcriptC05E11.5.1
Other_sequence (12)
Associated_feature (8)
Experimental_infoRNAi_resultWBRNAi00039772Inferred_automaticallyRNAi_primary
WBRNAi00070741Inferred_automaticallyRNAi_primary
WBRNAi00070740Inferred_automaticallyRNAi_primary
WBRNAi00097118Inferred_automaticallyRNAi_primary
WBRNAi00010222Inferred_automaticallyRNAi_primary
Expr_patternExpr1029164
Expr1143858
Expr2009328
Expr2027564
Drives_constructWBCnstr00037711
Construct_productWBCnstr00037711
Microarray_results (19)
Expression_cluster (244)
Interaction (43)
Map_infoMapXPosition-7.23815Error0.014761
PositivePositive_cloneC05E11Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Mapping_dataMulti_point (2)
Pseudo_map_position
ReferenceWBPaper00035429
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene