WormBase Tree Display for Gene: WBGene00004358
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| WBGene00004358 | SMap | S_parent | Sequence | F08F3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rhr-1 | |||||||
| Sequence_name | F08F3.3 | ||||||||
| Molecular_name | F08F3.3 | ||||||||
| F08F3.3.1 | |||||||||
| CE09259 | |||||||||
| Other_name | CELE_F08F3.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | rhr-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rhr | ||||||||
| Allele (35) | |||||||||
| Legacy_information | [Nettell J] rhr for Rh blood group antigen related. No mutants known. Predicted gene F08F3.3 | ||||||||
| Strain | WBStrain00003312 | ||||||||
| WBStrain00030768 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (52) | |||||||||
| Paralog | WBGene00000133 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00000134 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00000135 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00000136 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00004359 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | rhr-1 encodes an ortholog of human Rhesus blood-group associated glycoprotein (RHAG; OMIM:180297, mutated in chronic hemolytic anemia), a member of the ammonium transporter family, and affects general levels of mRNA transcripts, and embryonic viability in a large-scale RNAi screen. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00019491 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enables ammonium transmembrane transporter activity. Involved in ammonium transmembrane transport. Predicted to be located in plasma membrane. Expressed in head. Human ortholog(s) of this gene implicated in Rh deficiency syndrome; Rh isoimmunization; and overhydrated hereditary stomatocytosis. Is an ortholog of human RHAG (Rh associated glycoprotein); RHBG (Rh family B glycoprotein); and RHCG (Rh family C glycoprotein). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0050641 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10006) | ||||
| DOID:4175 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10009) | ||||||
| DOID:0111562 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10006) | ||||||
| DOID:583 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10006) | ||||||
| Molecular_info | Corresponding_CDS | F08F3.3 | |||||||
| Corresponding_transcript | F08F3.3.1 | ||||||||
| Other_sequence (59) | |||||||||
| Associated_feature | WBsf231758 | ||||||||
| WBsf231759 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030654 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00077594 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002398 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044017 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram125 | ||||||||
| Expr3969 | |||||||||
| Expr5683 | |||||||||
| Expr5684 | |||||||||
| Expr1017093 | |||||||||
| Expr1032175 | |||||||||
| Expr1147985 | |||||||||
| Expr2015339 | |||||||||
| Expr2033573 | |||||||||
| Drives_construct | WBCnstr00002746 | ||||||||
| WBCnstr00003783 | |||||||||
| WBCnstr00035541 | |||||||||
| Construct_product | WBCnstr00035541 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (237) | |||||||||
| Interaction (35) | |||||||||
| Map_info | Map | V | Position | -2.02048 | Error | 0.028616 | |||
| Positive | Positive_clone | F08F3 | Author_evidence | Nettell JJ | |||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Mapping_data | Multi_point | 5216 | |||||||
| 4182 | |||||||||
| 4348 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004651 | ||||||||
| WBPaper00019491 | |||||||||
| WBPaper00027209 | |||||||||
| WBPaper00032929 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00046515 | |||||||||
| WBPaper00049246 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
