WormBase Tree Display for Gene: WBGene00000099
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WBGene00000099 | SMap | S_parent | Sequence | B0207 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | air-2 | Person_evidence | WBPerson205 | |||||
Sequence_name | B0207.4 | ||||||||
Molecular_name | B0207.4 | ||||||||
B0207.4.1 | |||||||||
CE24761 | |||||||||
B0207.4.2 | |||||||||
Other_name | let-603 | ||||||||
stu-7 | |||||||||
cyk-6 | |||||||||
CELE_B0207.4 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | air-2 | ||||||||
DB_info | Database (14) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:20 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | air | ||||||||
Allele (19) | |||||||||
Legacy_information | [Hodgkin JA] e2631 hermaphrodites are long, uncoordinated and sterile, usually with a conspicuous constriction in the mid-region of the body. Males grow poorly, male tail very abnormal, ME0. | ||||||||
[McDowall JS] Sterile adult | |||||||||
[C.elegansII] h289 : sterile adult (gonad tumorous mass). OA3: h408, h437, h812 (sterile adults). Cloned: partial cosmid rescue (C32E7); rescued to Mel. [KR] | |||||||||
[Bowerman BA] temperature-sensitive embryonic lethal, permissive = 15 C, restrictive = 25 C. cytokinesis defects | |||||||||
Strain | WBStrain00023752 | ||||||||
WBStrain00035642 | |||||||||
WBStrain00004633 | |||||||||
WBStrain00007296 | |||||||||
WBStrain00007300 | |||||||||
WBStrain00034749 | |||||||||
WBStrain00051600 | |||||||||
WBStrain00051601 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (65) | |||||||||
Ortholog | WBGene00066584 | Caenorhabditis remanei | From_analysis | OMA | |||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00026778 | Caenorhabditis briggsae | From_analysis | Hillier-set | ||||||
OrthoMCL | |||||||||
OMA | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00153601 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
TreeFam | |||||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00176308 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WBGene00128903 | Caenorhabditis japonica | From_analysis | TreeFam | ||||||
Inparanoid_8 | |||||||||
WormBase-Compara | |||||||||
WBGene00193267 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | ||||||
WBGene00221969 | Brugia malayi | From_analysis | WormBase-Compara | ||||||
CBOVI.g12058 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CBOVI.g7587 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP21.g3121 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | ||||||
CSP26.g2039 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
CSP28.g3765 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
CSP29.g11150 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
CSP31.g22561 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP31.g535 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
CSP38.g21074 | Caenorhabditis quiockensis | From_analysis | WormBase-Compara | ||||||
CSP39.g18609 | Caenorhabditis waitukubuli | From_analysis | WormBase-Compara | ||||||
CSP40.g17012 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
Cang_2012_03_13_00204.g6948 | Caenorhabditis angaria | From_analysis | WormBase-Compara | ||||||
Cni-air-2 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
Csp11.Scaffold630.g17083 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
Csp5_scaffold_01534.g21540 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
FL83_14281 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
GCK72_001016 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
OTIPU.nOt.2.0.1.g04668 | Oscheius tipulae | From_analysis | WormBase-Compara | ||||||
Pan_g14184 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
Pan_g17746 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
Pan_g4707 | Panagrellus redivivus | From_analysis | WormBase-Compara | ||||||
Sp34_10293700 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||||
chrI_pilon.g1026 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
WBGene00248014 | Onchocerca volvulus | From_analysis | WormBase-Compara | ||||||
WBGene00111246 | Pristionchus pacificus | From_analysis | WormBase-Compara | ||||||
WBGene00259111 | Strongyloides ratti | From_analysis | WormBase-Compara | ||||||
SGD:S000006130 | Saccharomyces cerevisiae | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoFinder | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
PhylomeDB | |||||||||
SonicParanoid | |||||||||
FB:FBgn0024227 | Drosophila melanogaster | From_analysis | Inparanoid | ||||||
OMA | |||||||||
OrthoFinder | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
PhylomeDB | |||||||||
SonicParanoid | |||||||||
ZFIN:ZDB-GENE-040801-161 | Danio rerio | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
ZFIN:ZDB-GENE-020419-40 | Danio rerio | From_analysis | EnsEMBL-Compara | ||||||
Hieranoid | |||||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
HGNC:11393 | Homo sapiens | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
HGNC:11391 | Homo sapiens | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
HGNC:11390 | Homo sapiens | From_analysis | EnsEMBL-Compara | ||||||
Hieranoid | |||||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
MGI:1321119 | Mus musculus | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
MGI:107168 | Mus musculus | From_analysis | EnsEMBL-Compara | ||||||
Hieranoid | |||||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
MGI:894678 | Mus musculus | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
RGD:621625 | Rattus norvegicus | From_analysis | EnsEMBL-Compara | ||||||
Hieranoid | |||||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
RGD:628895 | Rattus norvegicus | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
RGD:1309573 | Rattus norvegicus | From_analysis | Hieranoid | ||||||
Inparanoid | |||||||||
OMA | |||||||||
OrthoInspector | |||||||||
Panther | |||||||||
SonicParanoid | |||||||||
Paralog | WBGene00000098 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
Structured_description | Concise_description | air-2 encodes an aurora/Ipl1-related serine/threonine protein kinase that affects embryonic viability and chromosome segregation during meiosis and mitosis and is required for cytokinesis; AIR-2 has two functions during mitosis, one in chromosome segregation, and a second, independent function in cytokinesis through ZEN-4; AIR-2 and ZEN-4 may act in parallel to a second pathway that includes CYK-1; AIR-2 phosphorylates two adjacent, evolutionarily conserved C-terminal serines of the inner centromere protein ICP-1; AIR-2 i modified in vitro by the GEI-17 E3 SUMO ligase; AIR-2 forms a robust complex with CSC-1, BIR-1, and ICP-1; air-2 is expressed highly in embryos, in the mature oocytes, spermatocytes, and extruded polar bodies. | Paper_evidence (12) | ||||||
Curator_confirmed | WBPerson48 | ||||||||
WBPerson1843 | |||||||||
WBPerson363 | |||||||||
WBPerson567 | |||||||||
Date_last_updated | 10 Jun 2015 00:00:00 | ||||||||
Automated_description | Enables ATPase binding activity; kinesin binding activity; and protein kinase activity. Involved in several processes, including chromosome condensation; regulation of actomyosin contractile ring contraction; and spindle midzone assembly. Located in condensed nuclear chromosome and spindle midzone. Expressed in oocyte and sperm. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); invasive ductal carcinoma; and prostate carcinoma in situ. Is an ortholog of human AURKB (aurora kinase B). | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:9256 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11393) | ||||
DOID:11054 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11393) | ||||||
DOID:3008 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11393) | ||||||
DOID:2871 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11390,HGNC:11393) | ||||||
DOID:2394 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11393) | ||||||
DOID:0070183 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11391) | ||||||
DOID:4450 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11393) | ||||||
DOID:8634 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11390,HGNC:11393) | ||||||
DOID:2152 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11393) | ||||||
DOID:363 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:11393) | ||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result (63) | ||||||||
Expr_pattern (11) | |||||||||
Drives_construct | WBCnstr00037734 | ||||||||
Construct_product | WBCnstr00000897 | ||||||||
WBCnstr00005318 | |||||||||
WBCnstr00005560 | |||||||||
WBCnstr00014917 | |||||||||
WBCnstr00017655 | |||||||||
WBCnstr00021506 | |||||||||
WBCnstr00037734 | |||||||||
Antibody | WBAntibody00000198 | ||||||||
WBAntibody00000511 | |||||||||
WBAntibody00001492 | |||||||||
WBAntibody00002053 | |||||||||
WBAntibody00002354 | |||||||||
WBAntibody00002454 | |||||||||
WBAntibody00002607 | |||||||||
WBAntibody00002722 | |||||||||
WBAntibody00002782 | |||||||||
Microarray_results (21) | |||||||||
Expression_cluster (167) | |||||||||
Interaction (256) | |||||||||
Map_info | Map | I | Position | 0.482005 | Error | 0.002155 | |||
Well_ordered | |||||||||
Positive | Positive_clone | B0207 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
C32E7 | |||||||||
Negative | Outside_rearr | hDf29 | |||||||
Negative_clone | C03E6 | ||||||||
C04F1 | |||||||||
C07F10 | |||||||||
C30B6 | |||||||||
C53A11 | |||||||||
Mapping_data | 2_point | 5225 | |||||||
5226 | |||||||||
Multi_point | 3520 | ||||||||
3865 | |||||||||
4380 | |||||||||
4601 | |||||||||
Pos_neg_data (12) | |||||||||
Reference (120) | |||||||||
Remark | [McDowall JS] Extrachromosomal array containing single cosmid generated, then manipulated genetically. Partial rescue: normally sterile adult with tumorous mass, develops to tumorless egg-laying adult, eggs do not develop or hatch. | ||||||||
testing swap around with sup-40, from 0.435 to 0.575 | |||||||||
same as cyk-6 according to cgc4544 and email 114. | |||||||||
same as air-2 according to cgc4544 and email 114. | |||||||||
old_name cyk-6 becomes new_name air-2 from [Woollard A, Hodgkin JA, Schumacher J]. | |||||||||
old_names let-603 and stu-7 had previously been identitifed with air-2. | |||||||||
Method | Gene |