WormBase Tree Display for Gene: WBGene00000097

WBGene00000097 SMap: S_parent: Sequence: F58E10
  Identity: Version: 1
    Name: CGC_name: aip-1 Person_evidence: WBPerson530
      Sequence_name: F58E10.4
      Molecular_name: F58E10.4
        F58E10.4.1
        CE18786
      Other_name: CELE_F58E10.4 Accession_evidence: NDB BX284605
      Public_name: aip-1
    DB_info: Database: AceView gene 5O493
        WormQTL gene WBGene00000097
        WormFlux gene WBGene00000097
        NDB locus_tag CELE_F58E10.4
        Panther gene CAEEL|WormBase=WBGene00000097|UniProtKB=Q9XUW8
          family PTHR14677
        NCBI gene 179898
        RefSeq protein NM_074078.4
        TREEFAM TREEFAM_ID TF314219
        TrEMBL UniProtAcc Q9XUW8
        UniProt_GCRP UniProtAcc Q9XUW8
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:20 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: aip
    Allele (11)
    Strain: WBStrain00035638
      WBStrain00036456
    RNASeq_FPKM (74)
    GO_annotation: 00102182
      00102183
      00102184
      00102185
      00102186
      00102187
      00102188
      00102189
      00102190
      00106777
    Ortholog: WBGene00052952 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00032523 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155978 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00152637 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00093454 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00119281 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00224816 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g2055 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g2004 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g8638 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4331 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g9387 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26930 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6824 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g678 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g17977 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g7597 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-aip-1 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold481.g1853 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02854.g28143 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_03683 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_018720 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g00242 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g15715 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50098200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g16401 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00244839 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00262088 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291185 Trichuris muris From_analysis: WormBase-Compara
      WBGene00299907 Trichuris muris From_analysis: WormBase-Compara
      SGD:S000005099 Saccharomyces cerevisiae From_analysis: Hieranoid
            Panther
      FB:FBgn0031535 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1596 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:28073 Homo sapiens From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:25206 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1916068 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2140729 Mus musculus From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1310991 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      RGD:1306260 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
    Structured_description: Concise_description: aip-1 encodes an AN-1-like zinc finger-containing protein homologous to arsenite-inducible RNA-associated protein (AIRAP), conserved among C. elegans, Drosophila, and mammals; like AIRAP itself, AIP-1 protects cells from arsenite toxicity; AIP-1 is a predicted RNA binding protein that may function in ubiquitin-mediated proteolysis following arsenite treatment; AIP-1 does not appear to be essential for viability, but is expressed at high levels in hypodermal and intestinal cells following such treatment. Paper_evidence: WBPaper00004641
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable zinc ion binding activity. Involved in cellular response to misfolded protein and response to arsenic-containing substance. Located in cytoplasm and nucleus. Expressed in body wall musculature; excretory cell; pharynx; and somatic gonad. Is an ortholog of human ZFAND2A (zinc finger AN1-type containing 2A) and ZFAND2B (zinc finger AN1-type containing 2B). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Modifies_disease: DOID:10652
  Modifies_disease_in_annotation: WBDOannot00000387
  Molecular_info: Corresponding_CDS: F58E10.4
    Corresponding_transcript: F58E10.4.1
    Other_sequence (14)
    Associated_feature: WBsf216751
      WBsf216752
      WBsf647506
      WBsf661074
      WBsf982036
      WBsf1001915
      WBsf232857
  Experimental_info (9)
  Map_info: Map: V Position: 5.91965 Error: 0.0241
    Positive: Positive_clone: F58E10 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4149
        4287
        4288
    Pseudo_map_position
  Reference (14)
  Remark: Sequence connection from [Sok J, Ron D]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene