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WormBase Tree Display for Gene: WBGene00004036

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Name Class

WBGene00004036SMapS_parentSequenceCHROMOSOME_X
IdentityVersion2
NameCGC_nameplc-1Person_evidenceWBPerson51
WBPerson1983
Sequence_nameF31B12.1
Molecular_name (36)
Other_namePLC210Paper_evidenceWBPaper00003022
WBPaper00003365
WBPaper00003875
WBPaper00003432
WBPaper00023291
frm-9Curator_confirmedWBPerson4025
CELE_F31B12.1Accession_evidenceNDBBX284606
Public_nameplc-1
DB_infoDatabase (14)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:33WBPerson1971EventImportedInitial conversion from geneace
220 May 2019 14:10:26WBPerson1983Name_changeCGC_nameplc-1
Other_namefrm-9
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classplc
Allele (621)
StrainWBStrain00002612
WBStrain00030932
WBStrain00030933
WBStrain00051732
RNASeq_FPKM (74)
GO_annotation (25)
OrthologWBGene00037171Caenorhabditis briggsaeFrom_analysisHillier-set
OrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00058405Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00156261Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00122248Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00223977Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g3555Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g14488Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP28.g5521Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15961Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g21792Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP31.g21794Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g2089Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g18696Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g8494Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g19907Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00373.g9941Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_X.g23381Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_X.g23383Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g13810Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00044.g2337Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00044.g2339Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_01253Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_023645Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g00727Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g20719Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_X0076800Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrX_pilon.g19952Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00079584Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00241961Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00110242Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00265806Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00285930Trichuris murisFrom_analysisWormBase-Compara
ZFIN:ZDB-GENE-061212-4Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
PhylomeDB
SonicParanoid
HGNC:17175Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
MGI:1921305Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:69424Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ParalogWBGene00001177Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004045Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004037Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004039Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00004038Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionplc-1 encodes a predicted phospholipase C that affects fertility and possesses two functional domains not commonly seen in other phospholipases: a C-terminal Ras-associating domain with structural similarity to RalGDS and AF-6, and an N-terminal CDC25-like domain that possesses structural homology to guanine nucleotide exchange proteins for Ras.Paper_evidenceWBPaper00003022
WBPaper00023291
Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionEnables GTPase inhibitor activity; phosphatidylinositol phospholipase C activity; and small GTPase binding activity. Involved in several processes, including 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process; defense response to Gram-positive bacterium; and positive regulation of protein import into nucleus. Expressed in excretory system; intestine; neurons; spermatheca; and vulva. Human ortholog(s) of this gene implicated in gastric adenocarcinoma; nephrotic syndrome type 2; and nephrotic syndrome type 3. Is an ortholog of human PLCE1 (phospholipase C epsilon 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:3717Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17175)
DOID:0080379Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17175)
DOID:1184Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17175)
DOID:0080382Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:17175)
Molecular_infoCorresponding_CDS (12)
Corresponding_CDS_historyF31B12.1a:wp40
F31B12.1b:wp40
F31B12.1b:wp52
Corresponding_transcript (12)
Other_sequence (49)
Associated_feature (13)
Experimental_infoRNAi_result (25)
Expr_pattern (11)
Drives_construct (5)
Construct_productWBCnstr00006426
WBCnstr00035730
Microarray_results (85)
Expression_cluster (182)
Interaction (14)
WBProcessWBbiopr:00000067
Map_infoMapXPosition2.53988Error0.004789
PositivePositive_cloneF31B12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00003022
WBPaper00015398
WBPaper00023291
WBPaper00024307
WBPaper00024374
WBPaper00026608
WBPaper00026831
WBPaper00027238
WBPaper00028130
WBPaper00030660
WBPaper00031631
WBPaper00032018
WBPaper00033094
WBPaper00033393
WBPaper00034114
WBPaper00034689
WBPaper00037051
WBPaper00037692
WBPaper00038491
WBPaper00038867
WBPaper00040857
WBPaper00041789
WBPaper00042257
WBPaper00042394
WBPaper00043994
WBPaper00046355
WBPaper00048291
WBPaper00049681
WBPaper00052003
WBPaper00052010
WBPaper00052220
WBPaper00055090
WBPaper00057892
WBPaper00057950
WBPaper00059947
WBPaper00060070
WBPaper00061547
WBPaper00062350
WBPaper00062625
WBPaper00063274
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene