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WormBase Tree Display for Gene: WBGene00002015

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Name Class

WBGene00002015SMapS_parentSequenceT27E4
IdentityVersion1
NameCGC_namehsp-16.1Person_evidenceWBPerson36
Sequence_nameT27E4.8
Molecular_nameT27E4.8
T27E4.8.1
CE14249
Other_namehsp-16
CELE_T27E4.8Accession_evidenceNDBBX284605
Public_namehsp-16.1
DB_infoDatabaseAceViewgene5J568
WormQTLgeneWBGene00002015
WormFluxgeneWBGene00002015
NDBlocus_tagCELE_T27E4.8
PanthergeneCAEEL|WormBase=WBGene00002015|UniProtKB=P34696
familyPTHR45640
NCBIgene179286
RefSeqproteinNM_072953.5
SwissProtUniProtAccP34696
UniProt_GCRPUniProtAccP34696
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:26WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classhsp
AlleleWBVar01499903
WBVar01500129
WBVar00091863
WBVar01499419
WBVar01499420
WBVar01499056
WBVar01499249
WBVar01499316
StrainWBStrain00004819
WBStrain00004820
WBStrain00030548
WBStrain00030720
WBStrain00030838
In_clusterHSP16A
RNASeq_FPKM (74)
GO_annotation00044149
00044150
00044151
00044152
00044153
00044154
00105765
00105800
00106135
00106136
OrthologWBGene00027233Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00027247Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00038449Caenorhabditis briggsaeFrom_analysisOrthoMCL
Inparanoid_8
WBGene00131763Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00073750Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00066180Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00143292Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00160093Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00145968Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00135524Caenorhabditis japonicaFrom_analysisInparanoid_8
WormBase-Compara
WBGene00052626Caenorhabditis remaneiFrom_analysisInparanoid_8
WormBase-Compara
WBGene00144127Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00150606Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00038447Caenorhabditis briggsaeFrom_analysisWormBase-Compara
WBGene00226306Brugia malayiFrom_analysisWormBase-Compara
WBGene00226851Brugia malayiFrom_analysisWormBase-Compara
WBGene00236790Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g12731Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12775Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12782Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12786Caenorhabditis bovisFrom_analysisWormBase-Compara
CBOVI.g12861Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g15081Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5546Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g5548Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g4575Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g17963Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g18639Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g5548Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g27284Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10285Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14652Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14656Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g14876Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g16155Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g6664Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP39.g22418Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g8372Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g17874Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g21398Caenorhabditis tribulationisFrom_analysisWormBase-Compara
CSP40.g23638Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cnig_chr_V.g20089Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20528Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g20544Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g16840Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold630.g19837Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00279.g8579Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_01089.g18310Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_19098Caenorhabditis latensFrom_analysisWormBase-Compara
FL83_24821Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_017210Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_017215Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_018405Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g10224Oscheius tipulaeFrom_analysisWormBase-Compara
Sp34_10087100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50235500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50235900Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329100Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329300Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50329700Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50330000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50355000Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50355500Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50355600Caenorhabditis inopinataFrom_analysisWormBase-Compara
Sp34_50359300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrV_pilon.g15164Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00208133Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00068604Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00068609Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073751Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00073756Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00236859Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00257141Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00257259Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00258086Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00261172Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265225Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00265337Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00288111Trichuris murisFrom_analysisWormBase-Compara
WBGene00289300Trichuris murisFrom_analysisWormBase-Compara
WBGene00294628Trichuris murisFrom_analysisWormBase-Compara
WBGene00294630Trichuris murisFrom_analysisWormBase-Compara
WBGene00296278Trichuris murisFrom_analysisWormBase-Compara
WBGene00296279Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0011296Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001229Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001227Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
FB:FBgn0001224Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
OMA
Panther
FB:FBgn0001223Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
Inparanoid
Panther
ZFIN:ZDB-GENE-020508-1Danio rerioFrom_analysisEnsEMBL-Compara
OMA
Panther
RGD:2413Rattus norvegicusFrom_analysisEnsEMBL-Compara
Inparanoid
Panther
Paralog (17)
Structured_descriptionConcise_descriptionhsp-16.1 encodes a 16-kD heat shock protein (HSP) that is a member of the hsp16/hsp20/alphaB-crystallin (HSP16) family of heat shock proteins, and that is identical to the protein encoded by hsp-16.11; an hsp-16.1 reporter fusion, expressed broadly but most strongly in muscle and hypodermis, is induced solely in response to heat shock or other environmental stresses; expression is detectable in somatic tissues in post-gastrulation embryos, all larval stages, and in adults; HSP-16.1 is likely to function as a passive ligand temporarily preventing unfolded proteins from aggregating.Paper_evidenceWBPaper00001187
WBPaper00001497
WBPaper00002665
WBPaper00004424
WBPaper00013029
WBPaper00013239
WBPaper00013280
Curator_confirmedWBPerson1843
Date_last_updated05 Nov 2004 00:00:00
Automated_descriptionPredicted to enable unfolded protein binding activity. Involved in defense response to Gram-negative bacterium and response to heat. Located in Golgi medial cisterna. Expressed in several structures, including coelomocyte; enteric muscle; intestine; pharynx; and ventral nerve cord.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoDisease_relevanceC. elegans is an effective model system to study heat-related pathologies like heat stroke; in elegans, a small heat shock protein (sHSP), HSP-16.1 has a protective effect against heat-induced necrosis; HSP-16.1 localizes to the golgi and functions together with the PMR-1/PMR1 Ca2+ and Mn2+ transporting ATPase, and NUCB-1/Nucleobindin1, a golgi-located calcium-buffering protein, to maintain calcium homeostasis, under heat stroke; overexpresiion of pmr-1/PMR1 is sufficient to promote survival after heat stroke, bypassing both HSF-1 and HSP-16.1, indicating that PMR-1/PMR1 functions downstream of both these genes.Homo sapiensPaper_evidenceWBPaper00041564
Curator_confirmedWBPerson324
Date_last_updated29 May 2013 00:00:00
Molecular_infoCorresponding_CDST27E4.8
Corresponding_transcriptT27E4.8.1
Other_sequence (60)
Associated_featureWBsf977958Paper_evidenceWBPaper00000918
WBsf977959Paper_evidenceWBPaper00000918
WBsf977962
WBsf1000813
WBsf234177
WBsf234178
Experimental_infoRNAi_resultWBRNAi00106381Inferred_automaticallyRNAi_primary
WBRNAi00106380Inferred_automaticallyRNAi_primary
WBRNAi00054311Inferred_automaticallyRNAi_primary
WBRNAi00067731Inferred_automaticallyRNAi_primary
WBRNAi00065457Inferred_automaticallyRNAi_primary
WBRNAi00019332Inferred_automaticallyRNAi_primary
WBRNAi00067741Inferred_automaticallyRNAi_primary
WBRNAi00063169Inferred_automaticallyRNAi_primary
WBRNAi00090661Inferred_automaticallyRNAi_primary
WBRNAi00093731Inferred_automaticallyRNAi_primary
WBRNAi00070147Inferred_automaticallyRNAi_primary
WBRNAi00065466Inferred_automaticallyRNAi_primary
WBRNAi00076719Inferred_automaticallyRNAi_primary
WBRNAi00063150Inferred_automaticallyRNAi_primary
WBRNAi00054312Inferred_automaticallyRNAi_primary
WBRNAi00019336Inferred_automaticallyRNAi_primary
WBRNAi00027601Inferred_automaticallyRNAi_primary
WBRNAi00065470Inferred_automaticallyRNAi_primary
WBRNAi00076720Inferred_automaticallyRNAi_primary
WBRNAi00103549Inferred_automaticallyRNAi_primary
WBRNAi00068005Inferred_automaticallyRNAi_primary
Expr_patternExpr1381
Expr1384
Expr10597
Expr11025
Expr15516
Expr1157862
Expr2012617
Expr2030853
Drives_construct (37)
Construct_productWBCnstr00010254
WBCnstr00017024
WBCnstr00019264
WBCnstr00036521
WBCnstr00042207
AntibodyWBAntibody00000049
WBAntibody00001859
Microarray_results (24)
Expression_cluster (245)
Interaction (92)
WBProcessWBbiopr:00000050
Map_infoMapVPosition1.9236Error0.000891
PositivePositive_cloneT27E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point (2)
Pseudo_map_position
Reference (121)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene