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WormBase Tree Display for Gene: WBGene00016759

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Name Class

WBGene00016759SMapS_parentSequenceC49A9
IdentityVersion1
NameSequence_nameC49A9.5
Molecular_nameC49A9.5
C49A9.5.1
CE16935
C49A9.5.2
Other_nameCELE_C49A9.5Accession_evidenceNDBBX284604
Public_nameC49A9.5
DB_infoDatabaseAceViewgene4G979
WormQTLgeneWBGene00016759
WormFluxgeneWBGene00016759
NDBlocus_tagCELE_C49A9.5
PanthergeneCAEEL|WormBase=WBGene00016759|UniProtKB=O44151
familyPTHR21516
NCBIgene177382
RefSeqproteinNM_001383100.2
TREEFAMTREEFAM_IDTF318575
TrEMBLUniProtAccO44151
UniProt_GCRPUniProtAccO44151
SpeciesCaenorhabditis elegans
HistoryVersion_change128 May 2004 13:30:57WBPerson1971EventImportedInitial conversion from CDS class of stlace from WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (43)
RNASeq_FPKM (74)
OrthologWBGene00066092Caenorhabditis remaneiFrom_analysisTreeFam
Inparanoid_8
WBGene00143681Caenorhabditis brenneriFrom_analysisTreeFam
Inparanoid_8
WBGene00124594Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WBGene00162707Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00027942Caenorhabditis briggsaeFrom_analysisWormBase-Compara
CSP26.g14555Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g11633Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP40.g10660Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cni-C49A9.6Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold630.g17356Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00045.g2376Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_013658Caenorhabditis remaneiFrom_analysisWormBase-Compara
chrIV_pilon.g10565Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00066088Caenorhabditis remaneiFrom_analysisWormBase-Compara
WBGene00078966Caenorhabditis remaneiFrom_analysisWormBase-Compara
ParalogWBGene00007087Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007724Caenorhabditis elegansFrom_analysisPanther
WBGene00007725Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00007728Caenorhabditis elegansFrom_analysisPanther
WBGene00008944Caenorhabditis elegansFrom_analysisPanther
WBGene00010850Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00010851Caenorhabditis elegansFrom_analysisPanther
WBGene00012822Caenorhabditis elegansFrom_analysisPanther
WBGene00012823Caenorhabditis elegansFrom_analysisPanther
WBGene00012824Caenorhabditis elegansFrom_analysisPanther
WBGene00012827Caenorhabditis elegansFrom_analysisPanther
WBGene00016755Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016756Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016757Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00016758Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019058Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00019057Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00017100Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00016763Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00017101Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00016760Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017102Caenorhabditis elegansFrom_analysisPanther
WBGene00044291Caenorhabditis elegansFrom_analysisPanther
WBGene00045461Caenorhabditis elegansFrom_analysisPanther
WBGene00050967Caenorhabditis elegansFrom_analysisPanther
WBGene00021809Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00195176Caenorhabditis elegansFrom_analysisPanther
WBGene00019260Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00045415Caenorhabditis elegansFrom_analysisPanther
WBGene00195177Caenorhabditis elegansFrom_analysisPanther
Structured_descriptionAutomated_descriptionEnriched in FLP; head mesodermal cell; intestine; and rectal gland cell based on tiling array; microarray; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including D-glucopyranose; bisphenol S; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF272) and Protein of unknown function DUF272.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC49A9.5
Corresponding_transcriptC49A9.5.1
C49A9.5.2
Associated_featureWBsf646006
WBsf646007
WBsf228376
Experimental_infoRNAi_resultWBRNAi00042767Inferred_automaticallyRNAi_primary
WBRNAi00012112Inferred_automaticallyRNAi_primary
WBRNAi00029959Inferred_automaticallyRNAi_primary
Expr_patternExpr1011104
Expr1037198
Expr1146753
Expr2001758
Expr2019986
Drives_constructWBCnstr00027825
Construct_productWBCnstr00027825
Microarray_results (15)
Expression_cluster (133)
InteractionWBInteraction000390571
WBInteraction000424829
WBInteraction000448054
Map_infoPositivePositive_cloneC49A9Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV3.10394
MethodGene