WormBase Tree Display for Gene: WBGene00021809
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| WBGene00021809 | SMap | S_parent | Sequence | Y53G8AR | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y53G8AR.1 | |||||||
| Molecular_name | Y53G8AR.1 | ||||||||
| Y53G8AR.1.1 | |||||||||
| CE25426 | |||||||||
| Other_name | Y53G8AR.h | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y53G8AR.1 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | Y53G8AR.1 | ||||||||
| DB_info | Database | AceView | gene | 3E421 | |||||
| WormQTL | gene | WBGene00021809 | |||||||
| WormFlux | gene | WBGene00021809 | |||||||
| NDB | locus_tag | CELE_Y53G8AR.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021809|UniProtKB=Q9N3F5 | |||||||
| family | PTHR21516 | ||||||||
| NCBI | gene | 190240 | |||||||
| RefSeq | protein | NM_065291.2 | |||||||
| TREEFAM | TREEFAM_ID | TF314652 | |||||||
| TrEMBL | UniProtAcc | Q9N3F5 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3F5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:05 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00142010 | Caenorhabditis brenneri | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WBGene00158288 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00164258 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00152448 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00140138 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00139905 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00060687 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| WBGene00081492 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| CSP31.g11633 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
| chrIII_pilon.g7236 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (31) | |||||||||
| Structured_description | Automated_description | Is affected by several genes including daf-2; eat-2; and clk-1 based on RNA-seq and microarray studies. Is affected by five chemicals including Psoralens; allantoin; and metformin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y53G8AR.1 | |||||||
| Corresponding_transcript | Y53G8AR.1.1 | ||||||||
| Associated_feature | WBsf991729 | ||||||||
| WBsf1014538 | |||||||||
| WBsf1014539 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037443 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057311 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020965 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019482 | ||||||||
| Expr1160748 | |||||||||
| Expr2007872 | |||||||||
| Expr2026113 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (55) | |||||||||
| Map_info | Positive | Positive_clone | Y53G8AR | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -7.24361 | |||||||
| Method | Gene |
