WormBase Tree Display for Gene: WBGene00021948

WBGene00021948 SMap: S_parent: Sequence: Y55F3C
  Identity: Version: 3
    Name: CGC_name: kvs-5 Person_evidence: WBPerson260
            WBPerson145
      Sequence_name: Y55F3C.3
      Molecular_name (18)
      Other_name: Y55F3C.f Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        Y55F3C.e Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_Y55F3C.3 Accession_evidence: NDB BX284604
      Public_name: kvs-5
    DB_info: Database: AceView gene 4B505
        WormQTL gene WBGene00021948
        WormFlux gene WBGene00021948
        NDB locus_tag CELE_Y55F3C.3
        Panther gene CAEEL|WormBase=WBGene00021948|UniProtKB=U4PLR3
          family PTHR11537
        NCBI gene 176899
        RefSeq protein NM_067577.8
            NM_001307395.4
            NM_001307396.4
            NM_001307394.3
            NM_001307393.3
            NM_001307392.3
        TrEMBL UniProtAcc U4PE60
            U4PR20
            U4PBB7
            U4PAX5
            Q95XV8
            U4PLR3
        UniProt_GCRP UniProtAcc U4PLR3
        OMIM gene 600397
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:05 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 29 Jul 2011 16:30:08 WBPerson2970 Name_change: CGC_name: kvs-5
        3 04 Sep 2013 14:28:38 WBPerson4025 Event: Acquires_merge: WBGene00043706
      Acquires_merge: WBGene00043706
    Status: Live
  Gene_info (9)
  Disease_info: Potential_model: DOID:0080461 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6231)
      DOID:1826 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:6231)
  Molecular_info: Corresponding_CDS: Y55F3C.3a
      Y55F3C.3c
      Y55F3C.3d
      Y55F3C.3e
      Y55F3C.3f
      Y55F3C.3g
    Corresponding_CDS_history: Y55F3C.3:wp175
      Y55F3C.3b:wp274
    Corresponding_transcript: Y55F3C.3a.1
      Y55F3C.3c.1
      Y55F3C.3d.1
      Y55F3C.3e.1
      Y55F3C.3f.1
      Y55F3C.3g.1
    Other_sequence (19)
    Associated_feature (27)
  Experimental_info: RNAi_result: WBRNAi00021056 Inferred_automatically: RNAi_primary
      WBRNAi00002374 Inferred_automatically: RNAi_primary
      WBRNAi00057555 Inferred_automatically: RNAi_primary
      WBRNAi00021057 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9462
      Expr1016026
      Expr1017500
      Expr1039655
      Expr1160988
      Expr1160989
      Expr2012988
      Expr2031220
    Drives_construct: WBCnstr00024396
    Construct_product: WBCnstr00014027
      WBCnstr00024396
    Microarray_results: SMD_Y55F3C.E
      SMD_Y55F3C.F
      175977_s_at
      176027_at
      A_12_P112717
      A_12_P115481
      A_12_P154565
      A_12_P154566
      Aff_Y55F3C_751.F
      Aff_Y55F3C_751.G
      GPL13394_WBGene00021948
      GPL13394_WBGene00043706
      GPL13914_Y55F3C.3
      GPL13914_Y55F3C.4
      GPL14144_Y55F3C.3a_1325-1384_0.921_1_A
      GPL14144_Y55F3C.3a_1441-1500_0.899_8_B
      GPL14144_Y55F3C.3a_776-835_0.917_3_C
      GPL14144_Y55F3C.4_122-181_0.716_10_B
      GPL14144_Y55F3C.4_16-75_0.921_1_A
      GPL14144_Y55F3C.4_9-68_0.910_2_C
      GPL19516_CGZ0049411
      GPL19516_CGZ0049412
      GPL19516_CGZ0049413
      GPL19516_CGZ0049414
      GPL19516_CGZ0049415
      GPL19516_CGZ0049416
      GPL19516_CGZ0049417
      GPL21109_Y55F3C.3a
      GPL3518_CE22563
      GPL3518_CE29886
      GPL8304_CE_WBGene00021948_A
      GPL8304_CE_WBGene00021948_B
      GPL8304_CE_WBGene00043706_A
      GPL8304_CE_WBGene00043706_B
      GPL8673_Y55F3C_3P00146
      GPL8673_Y55F3C_3P00898
      GPL8673_Y55F3C_3P01157
      GPL8673_Y55F3C_4P00113
      GPL8673_Y55F3C_4P00159
      GPL8673_Y55F3C_4P00166
      GPL9450_Y55F3C.3
      GPL9450_Y55F3C.4
      cea2.i.30723
      cea2.p.102625
    Expression_cluster (195)
    Interaction (9)
  Map_info: Map: IV Position: -23.571 Error: 0.008513
    Positive: Positive_clone: Y55F3C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038444
    WBPaper00038491
    WBPaper00055090
    WBPaper00064898
    WBPaper00065331
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene