WormBase Tree Display for Gene: WBGene00021671
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WBGene00021671 | SMap | S_parent | Sequence | Y48G1BM | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (67) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog (11) | ||||||
Paralog (20) | ||||||
Structured_description | Automated_description | Enriched in neurons and retrovesicular ganglion based on RNA-seq and microarray studies. Is affected by several genes including daf-16; daf-2; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by nine chemicals including multi-walled carbon nanotube; Alovudine; and metformin based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed (2) | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | Y48G1BM.6a | ||||
Corresponding_CDS_history | Y48G1BM.6:wp199 | |||||
Y48G1BM.6:wp214 | ||||||
Y48G1BM.6:wp265 | ||||||
Corresponding_transcript | Y48G1BM.6d | |||||
Y48G1BM.6a.1 | ||||||
Corresponding_pseudogene_history | Y48G1BM.6:wp279 | |||||
Associated_feature (11) | ||||||
Experimental_info | RNAi_result | WBRNAi00055472 | Inferred_automatically | RNAi_primary | ||
WBRNAi00056947 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00056946 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00058283 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00019988 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1013491 | |||||
Expr1039488 | ||||||
Expr1160392 | ||||||
Expr2007682 | ||||||
Expr2025924 | ||||||
Microarray_results | 176182_s_at | |||||
187373_s_at | ||||||
A_12_P116747 | ||||||
A_12_P176576 | ||||||
GPL13394_WBGene00021671 | ||||||
GPL13914_Y48G1BM.6 | ||||||
GPL14144_Y48G1BM.6_1688-1747_0.714_333_A | ||||||
GPL19516_CGZ0047239 | ||||||
GPL21109_Y48G1BM.6 | ||||||
GPL8673_Y48G1BM_6P00702 | ||||||
GPL8673_Y48G1BM_6P01041 | ||||||
GPL8673_Y48G1BM_6P01734 | ||||||
GPL8673_Y54G2A_21P01476 | ||||||
GPL8673_Y54G2A_21P01523 | ||||||
cea2.3.27268 | ||||||
cea2.3.28897 | ||||||
Expression_cluster (154) | ||||||
Interaction | WBInteraction000373465 | |||||
WBInteraction000373467 | ||||||
WBInteraction000373469 | ||||||
Map_info | Positive | Positive_clone | Y48G1BM | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | I | -19.1182 | ||||
Remark | [2020-11-10T23:53:02.969Z WBPerson51134] Gene Split creating Y48G1BM.10 WBGene00306121: Seems to be a fusion of CDS Y48G1BM.6 and CDS Y48G1BM.10 | Curator_confirmed | WBPerson51134 | |||
[2020-11-10T23:54:39.038Z WBPerson51134] Gene Updated: Biotype changed to CDS | Curator_confirmed | WBPerson51134 | ||||
Method | Gene |