WormBase Tree Display for Gene: WBGene00021545
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WBGene00021545 | SMap | S_parent | Sequence | Y43H11AL | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | Y43H11AL.1 | |||||||
Molecular_name (18) | |||||||||
Other_name | Y43H11AL.d | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y43H11AL.1 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | Y43H11AL.1 | ||||||||
DB_info | Database | AceView | gene | 2A514C | |||||
2A514 | |||||||||
WormQTL | gene | WBGene00021545 | |||||||
WormFlux | gene | WBGene00021545 | |||||||
NDB | locus_tag | CELE_Y43H11AL.1 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00021545|UniProtKB=H2L057 | |||||||
family | PTHR10333 | ||||||||
NCBI | gene | 173408 | |||||||
RefSeq | protein | NM_001313672.3 | |||||||
NM_001267078.2 | |||||||||
NM_001313673.3 | |||||||||
NM_001313671.3 | |||||||||
NM_001392989.1 | |||||||||
TrEMBL | UniProtAcc | A0A0K3AX31 | |||||||
Q8IAA7 | |||||||||
A0A0K3AR60 | |||||||||
A0A0K3AUR6 | |||||||||
H2L057 | |||||||||
UniProt_GCRP | UniProtAcc | H2L057 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (164) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00000655 | ||||||||
00000656 | |||||||||
00000657 | |||||||||
00000658 | |||||||||
00000659 | |||||||||
00000660 | |||||||||
Contained_in_operon | CEOP2016 | ||||||||
Ortholog (24) | |||||||||
Paralog | WBGene00013095 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00020287 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Automated_description | Predicted to enable methylated histone binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y43H11AL.1a | |||||||
Y43H11AL.1b | |||||||||
Y43H11AL.1c | |||||||||
Y43H11AL.1d | |||||||||
Y43H11AL.1e | |||||||||
Corresponding_CDS_history | Y43H11AL.1a:wp90 | ||||||||
Y43H11AL.1a:wp91 | |||||||||
Corresponding_transcript | Y43H11AL.1a.1 | ||||||||
Y43H11AL.1a.2 | |||||||||
Y43H11AL.1a.3 | |||||||||
Y43H11AL.1a.4 | |||||||||
Y43H11AL.1b.1 | |||||||||
Y43H11AL.1c.1 | |||||||||
Y43H11AL.1d.1 | |||||||||
Y43H11AL.1e.1 | |||||||||
Other_sequence | MP01664 | ||||||||
CBC15506_1 | |||||||||
MI04191 | |||||||||
Associated_feature | WBsf665302 | ||||||||
WBsf665303 | |||||||||
WBsf976408 | |||||||||
WBsf976409 | |||||||||
WBsf976410 | |||||||||
Experimental_info | RNAi_result | WBRNAi00056536 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00015229 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032467 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1024256 | ||||||||
Expr1039425 | |||||||||
Expr1160012 | |||||||||
Expr2007524 | |||||||||
Expr2025761 | |||||||||
Microarray_results | SMD_F48A11.6 | ||||||||
172674_x_at | |||||||||
174810_at | |||||||||
176477_at | |||||||||
A_12_P101176 | |||||||||
Aff_F48A11.6 | |||||||||
GPL13394_WBGene00021545 | |||||||||
GPL13914_Y43H11AL.1 | |||||||||
GPL14144_Y43H11AL.1_302-361_0.914_11_C | |||||||||
GPL14144_Y43H11AL.1_788-847_0.883_24_A | |||||||||
GPL14144_Y43H11AL.1_891-950_0.949_1_B | |||||||||
GPL19516_CGZ0046409 | |||||||||
GPL19516_CGZ0046410 | |||||||||
GPL19516_CGZ0046411 | |||||||||
GPL19516_CGZ0046412 | |||||||||
GPL21109_Y43H11AL.1a.1 | |||||||||
GPL8304_CE_WBGene00021545_A | |||||||||
GPL8673_Y43H11AL_1P00293 | |||||||||
GPL8673_Y43H11AL_1P00476 | |||||||||
GPL8673_Y43H11AL_1P00941 | |||||||||
GPL9450_Y43H11AL.1 | |||||||||
cea2.p.49829 | |||||||||
Expression_cluster (87) | |||||||||
Interaction | WBInteraction000030678 | ||||||||
WBInteraction000032287 | |||||||||
WBInteraction000515308 | |||||||||
WBInteraction000515997 | |||||||||
WBInteraction000543772 | |||||||||
WBInteraction000546295 | |||||||||
Map_info | Positive | Positive_clone | Y43H11AL | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -15.7547 | |||||||
Reference | WBPaper00026935 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |