WormBase Tree Display for Gene: WBGene00020287
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| WBGene00020287 | SMap | S_parent | Sequence | T06A10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lsy-13 | Person_evidence | WBPerson260 | |||||
| Sequence_name | T06A10.4 | ||||||||
| Molecular_name | T06A10.4a | ||||||||
| T06A10.4a.1 | |||||||||
| CE19561 | |||||||||
| T06A10.4b | |||||||||
| CE50543 | |||||||||
| T06A10.4b.1 | |||||||||
| Other_name | CELE_T06A10.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | lsy-13 | ||||||||
| DB_info | Database | AceView | gene | 4R807 | |||||
| WormQTL | gene | WBGene00020287 | |||||||
| WormFlux | gene | WBGene00020287 | |||||||
| NDB | locus_tag | CELE_T06A10.4 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00020287|UniProtKB=A3QMD7 | |||||||
| family | PTHR10333 | ||||||||
| NCBI | gene | 178470 | |||||||
| RefSeq | protein | NM_001380559.1 | |||||||
| NM_001380560.2 | |||||||||
| SwissProt | UniProtAcc | A3QMD7 | |||||||
| UniProt_GCRP | UniProtAcc | A3QMD7 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 May 2010 15:53:40 | WBPerson2970 | Name_change | CGC_name | lsy-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lsy | ||||||||
| Allele (37) | |||||||||
| Strain | WBStrain00032042 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00004409 | ||||||||
| 00004410 | |||||||||
| 00004411 | |||||||||
| 00004412 | |||||||||
| 00004413 | |||||||||
| 00004414 | |||||||||
| 00004415 | |||||||||
| 00004416 | |||||||||
| 00004417 | |||||||||
| Contained_in_operon | CEOP4668 | ||||||||
| CEOP4590 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00013095 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00021545 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable methylated histone binding activity. Involved in cell fate specification; maintenance of left/right asymmetry; and positive regulation of gene expression. Predicted to be located in nucleus. Predicted to be part of NuA4 histone acetyltransferase complex. Is an ortholog of human ING4 (inhibitor of growth family member 4). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T06A10.4a | |||||||
| T06A10.4b | |||||||||
| Corresponding_transcript | T06A10.4a.1 | ||||||||
| T06A10.4b.1 | |||||||||
| Other_sequence | CRC06053_1 | ||||||||
| Associated_feature | WBsf660971 | ||||||||
| WBsf660972 | |||||||||
| WBsf981867 | |||||||||
| WBsf998933 | |||||||||
| Transcription_factor | WBTranscriptionFactor000709 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00052611 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052610 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016247 | ||||||||
| Expr1038836 | |||||||||
| Expr1156217 | |||||||||
| Expr2013302 | |||||||||
| Expr2031533 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Map | IV | Position | 15.3787 | Error | 0.000806 | |||
| Positive | Positive_clone | T06A10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| WBPaper00037651 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
