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WormBase Tree Display for Gene: WBGene00021407

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Name Class

WBGene00021407SMapS_parentSequenceY38C1AB
Identity (6)
Gene_infoBiotypeSO:0001217
AlleleWBVar02124693
WBVar02124694
WBVar02124008
WBVar01499264
WBVar02122383
WBVar02122574
WBVar01498363
WBVar02124785
WBVar01499324
RNASeq_FPKM (74)
GO_annotation00125769
00125770
Ortholog (30)
ParalogWBGene00008019Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00008471Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00010162Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00012363Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015361Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015861Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00015871Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00021403Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00044620Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00045103Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionPredicted to enable glycosyltransferase activity. Predicted to be located in membrane. Is an ortholog of human C1GALT1C1L (C1GALT1 specific chaperone 1 like).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSY38C1AB.5
Corresponding_CDS_historyY38C1AB.5:wp88
Y38C1AB.5:wp150
Corresponding_transcriptY38C1AB.5.1
Experimental_infoRNAi_result (11)
Expr_patternExpr1159514
Expr2007296
Expr2025529
Microarray_resultsSMD_T02H7.1
SMD_T02H7.6
SMD_Y38C1AB.
SMD_Y38C1AB.E
SMD_Y38C1AB.F
SMD_Y38C1AB.K
SMD_Y38C1AB.L
186604_s_at
A_12_P100380
Aff_T02H7.1
GPL14144_Y38C1AB.1_199-258_0.920_12_C
GPL14144_Y38C1AB.1_320-379_0.918_15_A
GPL14144_Y38C1AB.1_46-105_0.922_11_B
GPL19516_CGZ0044541
GPL21109_Y38C1AB.1
GPL8304_CE_WBGene00021403_A
GPL8304_CE_WBGene00021407_A
GPL8673_Y38C1AB_1P00051
GPL8673_Y38C1AB_1P00410
GPL8673_Y38C1AB_1P00623
GPL8673_Y38C1AB_5P00051
GPL8673_Y38C1AB_5P00410
GPL8673_Y38C1AB_5P00623
Expression_cluster (81)
Map_infoPositivePositive_cloneY38C1ABInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIV-27.2626
ReferenceWBPaper00029024
WBPaper00038491
WBPaper00049531
WBPaper00055090
MethodGene