WormBase Tree Display for Gene: WBGene00021183
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| WBGene00021183 | SMap | S_parent | Sequence | Y9C9A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y9C9A.16 | |||||||
| Molecular_name | Y9C9A.16a | ||||||||
| Y9C9A.16a.1 | |||||||||
| CE39879 | |||||||||
| Y9C9A.16b | |||||||||
| CE47751 | |||||||||
| Y9C9A.16b.1 | |||||||||
| Other_name | CELE_Y9C9A.16 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | Y9C9A.16 | ||||||||
| DB_info | Database | AceView | gene | 4F728 | |||||
| WormQTL | gene | WBGene00021183 | |||||||
| WormFlux | gene | WBGene00021183 | |||||||
| NDB | locus_tag | CELE_Y9C9A.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00021183|UniProtKB=J7SF87 | |||||||
| family | PTHR10632 | ||||||||
| NCBI | gene | 189421 | |||||||
| RefSeq | protein | NM_068287.5 | |||||||
| NM_001276820.3 | |||||||||
| TrEMBL | UniProtAcc | J7SF87 | |||||||
| Q9N2S1 | |||||||||
| UniProt_GCRP | UniProtAcc | J7SF87 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:04 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (40) | |||||||||
| Strain | WBStrain00033160 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024019 | ||||||||
| 00024020 | |||||||||
| 00024021 | |||||||||
| 00024022 | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00008538 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable FAD binding activity and sulfide:quinone oxidoreductase activity. Predicted to be involved in sulfide oxidation, using sulfide:quinone oxidoreductase. Predicted to be located in mitochondrion. Is an ortholog of human SQOR (sulfide quinone oxidoreductase). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS (2) | ||||||||
| Corresponding_CDS_history | Y9C9A.16:wp154 | ||||||||
| Corresponding_transcript (2) | |||||||||
| Other_sequence (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00058705 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00021552 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00058704 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014783 | ||||||||
| Expr1162123 | |||||||||
| Expr2008535 | |||||||||
| Expr2026773 | |||||||||
| Drives_construct | WBCnstr00024642 | ||||||||
| Construct_product | WBCnstr00024642 | ||||||||
| Microarray_results | SMD_Y9C9A_54.A | ||||||||
| 184710_at | |||||||||
| A_12_P108069 | |||||||||
| A_12_P154670 | |||||||||
| A_12_P154671 | |||||||||
| Aff_Y9C9A_54.A | |||||||||
| GPL13394_WBGene00021183 | |||||||||
| GPL13914_Y9C9A.16 | |||||||||
| GPL14144_Y9C9A.16_1031-1090_0.962_1_A | |||||||||
| GPL19516_CGZ0013361 | |||||||||
| GPL19516_CGZ0055416 | |||||||||
| GPL19516_CGZ0055417 | |||||||||
| GPL21109_Y9C9A.16a | |||||||||
| GPL21109_Y9C9A.32 | |||||||||
| GPL21109_Y9C9A.74 | |||||||||
| GPL3518_CE25650 | |||||||||
| GPL8304_CE_WBGene00021183_A | |||||||||
| GPL8673_Y9C9A_16P00081 | |||||||||
| GPL8673_Y9C9A_16P00378 | |||||||||
| GPL8673_Y9C9A_16P00600 | |||||||||
| GPL9450_Y9C9A.16 | |||||||||
| cea2.i.31457 | |||||||||
| Expression_cluster (161) | |||||||||
| Interaction | WBInteraction000519850 | ||||||||
| WBInteraction000567730 | |||||||||
| Map_info | Positive | Positive_clone | Y9C9A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 1.39433 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042128 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
