WormBase Tree Display for Gene: WBGene00020855

WBGene00020855 SMap: S_parent: Sequence: CHROMOSOME_V
  Identity: Version: 4
    Name: CGC_name: hpo-36 Paper_evidence: WBPaper00038231
          Person_evidence: WBPerson26
      Sequence_name: T27C4.2
      Molecular_name: T27C4.2a
        T27C4.2a.1
        CE51251
        T27C4.2b
        CE51502
        T27C4.2b.1
      Other_name: Y39H10A.c
        Y39H10A.d
        Y39H10A.e
        CELE_T27C4.2 Accession_evidence: NDB BX284605
      Public_name: hpo-36
    DB_info: Database: AceView gene 5E204
        WormQTL gene WBGene00020855
        WormFlux gene WBGene00020855
        NDB locus_tag CELE_T27C4.2
        NCBI gene 188979
        RefSeq protein NM_001322544.3
            NM_001322543.3
        TrEMBL UniProtAcc A0A131MCT7
            A0A131MCZ0
        UniProt_GCRP UniProtAcc A0A131MCT7
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 26 Apr 2011 13:31:47 WBPerson2970 Name_change: CGC_name: hpo-36
        3 18 Feb 2016 15:51:46 WBPerson4025 Event: Acquires_merge: WBGene00021480
        4 18 Feb 2016 15:51:46 WBPerson4025 Event: Acquires_merge: WBGene00021481
      Acquires_merge: WBGene00021480
        WBGene00021481
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hpo
    Allele (209)
    RNASeq_FPKM (74)
    GO_annotation: 00002164
    Ortholog (30)
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T27C4.2a
      T27C4.2b
    Corresponding_CDS_history: T27C4.2:wp252
    Corresponding_transcript (2)
    Other_sequence: HBC01672_1
      JI165800.1
      HGC04625_1
      HG09334
      EX010858.1
    Associated_feature (18)
  Experimental_info: RNAi_result (11)
    Expr_pattern: Expr1010357
      Expr1012772
      Expr1025389
      Expr1039092
      Expr1039388
      Expr1157838
      Expr1159781
      Expr1159782
      Expr2012576
      Expr2030812
    Microarray_results: SMD_T27C4.2
      SMD_T27C4.2:2
      SMD_Y39H10A_225.B
      SMD_Y39H10A_225.C
      SMD_Y39H10A_225.D
      176545_at
      176558_at
      180149_at
      A_12_P111682
      A_12_P119386
      Aff_T27C4.2
      Aff_Y39H10A_225.B
      Aff_Y39H10A_225.C
      GPL13394_WBGene00020855
      GPL13394_WBGene00021480
      GPL13914_T27C4.2
      GPL13914_Y39H10A.4
      GPL14144_T27C4.2_1202-1261_0.884_33_C
      GPL14144_T27C4.2_1668-1727_0.935_5_B
      GPL14144_T27C4.2_1756-1815_0.942_1_A
      GPL14144_Y39H10A.4_438-497_0.943_3_C
      GPL14144_Y39H10A.4_692-751_0.959_1_A
      GPL14144_Y39H10A.4_700-759_0.955_2_B
      GPL14144_Y39H10A.5_128-187_0.942_1_A
      GPL19516_CGZ0037091
      GPL19516_CGZ0045036
      GPL21109_T27C4.2
      GPL21109_Y39H10A.4
      GPL3518_CE18296
      GPL3518_CE21781
      GPL8304_CE_WBGene00020855_A
      GPL8304_CE_WBGene00021480_A
      GPL8673_T27C4_2P00993
      GPL8673_T27C4_2P01361
      GPL8673_T27C4_2P01860
      GPL8673_Y39H10A_4P00471
      GPL8673_Y39H10A_4P00506
      GPL8673_Y39H10A_4P00600
      GPL8673_Y39H10A_5P00164
      GPL9450_T27C4.2
      GPL9450_Y39H10A.4
      cea2.i.45444
      cea2.i.46977
    Expression_cluster (180)
    Interaction: WBInteraction000383432
      WBInteraction000452907
  Map_info: Map: V Position: -8.08612 Error: 0.032472
    Positive: Positive_clone: T27C4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene